[Fri Aug 26 16:56:54 2016] >Input file: TMH3BS26M1D.pdb >TM segments: 37-63 MAIDEN score = -5.3143 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A52 -A59 0.339798052546291 G48 -L55 0.283486507646913 G45 -I50 0.255352949766193 G53 -I60 0.210882376500476 L42 -V47 0.19698312467537 P49 -S57 0.188105171425991 I41 -G48 0.178047349622825 M44 -G53 0.176500250193455 T51 -A59 0.162916085691237 G48 -A58 0.161636831452177 G45 -G53 0.154393830690194 A52 -I60 0.149954124153422 S38 -M44 0.149538881577414 L42 -P49 0.126369125832667 G53 -A61 0.106111656355684 S40 -V47 0.106103228499948 S40 -I46 0.0908479039044838 I41 -I50 0.0761638321030012 G53 -G62 0.0760984140049993 L43 -T51 0.0684966972622795 V47 -L55 0.06542662106148 L55 -I60 0.0629409766825946 T51 -I60 0.0467643605554984 T56 -V63 0.0433611662908282 V39 -G45 0.0429800594965464 G53 -A59 0.0406771670813608 I41 -P49 0.033401670018071 T51 -T56 0.0332085890852358 I50 -A58 0.032659957125075 S40 -G48 0.0323903716946118 I54 -I60 0.0306151599288018 M44 -P49 0.0292687532934668 I41 -V47 0.0272534873571049 S38 -G45 0.0221924232291859 I54 -G62 0.0212178192682417 M44 -I50 0.0154772294583854 G48 -T56 0.0138159438993233 I50 -A59 0.0119582488223031 M44 -A52 0.0109875319573991 A52 -A61 0.0107356478486498 P49 -A58 0.00601191581497851 S57 -G62 0.0043278351854279 M37 -L42 0.00411495038354381 L42 -T51 -0.0015618262846866 A52 -S57 -0.0055632012987632 V47 -T56 -0.0068541119325598 I46 -T51 -0.024870539186983 S40 -P49 -0.0297599437307978 G48 -S57 -0.0391083454377052 P49 -T56 -0.0394723530721102 P49 -I54 -0.0516670136814206 G45 -I54 -0.0560535037948924 V39 -M44 -0.0621174241595457 I41 -I46 -0.0780465794376983 I46 -L55 -0.0794034641533923 T56 -G62 -0.0797556483921298 V47 -G53 -0.0861715488459507 G45 -A52 -0.0887404665924474 L43 -I50 -0.09454972748388 L42 -I50 -0.0960689906055503 I54 -V63 -0.108079298662076 T56 -A61 -0.125579287754862 L43 -A52 -0.144910708167107 S40 -G45 -0.158764511626877 L42 -G48 -0.162232197164817 L55 -G62 -0.167988004671853 A52 -A58 -0.169642500697776 G45 -T51 -0.177227249663062 I50 -S57 -0.17794369622134 V47 -I54 -0.191327134505987 G48 -I54 -0.192409029137545 I46 -I54 -0.199428564589001 S57 -V63 -0.199635595492097 L55 -V63 -0.218116438686446 T51 -S57 -0.222094846296903 L55 -A61 -0.22253463565754 T51 -A58 -0.22409037168382 I46 -G53 -0.268026500203832 G48 -G53 -0.272214633174789 M44 -T51 -0.287243986281807 I54 -A61 -0.302716182416851 I46 -A52 -0.320941393212328 I54 -A59 -0.342527533892985 V47 -A52 -0.351910127282007 I50 -L55 -0.378129554170766 I50 -T56 -0.392559534457763 L43 -G48 -0.398341157585145 A58 -V63 -0.412861867446894 G53 -A58 -0.43316314349017 P49 -L55 -0.52811101883837 L43 -P49 -0.543337438329467