[Mon Aug 29 17:05:38 2016] >Input file: TMH3BTS6M1G.pdb >TM segments: 91-107_ 133-156 MAIDEN score = -14.3809 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L103 -I143 1.1282450380065 W104 -I143 0.954294295873238 I107 -V139 0.714421040573958 C100 -I143 0.578362361071497 L103 -S142 0.546104079314568 C100 -I146 0.454639635997046 C100 -I147 0.416290711512907 I107 -A140 0.392110200653341 I107 -I143 0.377420890742176 W104 -V144 0.360371508644136 D98 -L103 0.271630075561251 N91 -C100 0.269461005056433 C100 -V144 0.235717722945825 L92 -T150 0.21085157873139 V101 -S142 0.207469717380101 L103 -V139 0.205385116174827 V101 -A140 0.159980698227921 I105 -I143 0.156043816272634 L92 -K152 0.154075591188405 S142 -W148 0.15134699525113 V144 -M151 0.151170467468032 N91 -M151 0.14863968345347 I97 -I147 0.146537394569845 N91 -F153 0.141780146726917 C100 -V139 0.141457982959524 V101 -F106 0.139405881455328 A93 -M151 0.13320004329599 N133 -A141 0.129706176861954 L137 -V144 0.128755958886972 N91 -D98 0.128530947315351 I105 -A140 0.125710306479091 I107 -I146 0.123791867383973 A99 -W104 0.121550000260308 W104 -F145 0.121193481074226 D98 -T150 0.117295492897276 A96 -V144 0.111158993125718 A93 -V101 0.110922014311253 A141 -W148 0.109738297109093 L135 -S142 0.108907584313696 N133 -A140 0.106447676499271 I102 -I147 0.106113246288661 T134 -A141 0.10168278497639 A140 -I146 0.101667229237762 L92 -T149 0.0990810599012892 S142 -T149 0.098008414933648 A99 -V139 0.0965528208914579 T149 -V156 0.0947863854841087 A93 -D98 0.0937530420362513 C100 -M151 0.0934683971450783 A99 -V144 0.0925113045688767 W148 -F153 0.0914107239628104 L94 -L103 0.0880228374755689 L103 -A138 0.0860545861336208 L92 -I102 0.0859952698038764 A96 -S142 0.083389566177281 T134 -S142 0.0827398352533009 S95 -L103 0.0820321628149134 N91 -T149 0.0815218384431793 A93 -C100 0.0784263840644432 D98 -V144 0.0779281629618023 I107 -A141 0.0774477176361978 V139 -I147 0.0770890711428225 D98 -I143 0.0757086182695939 A96 -M151 0.0750858328415036 L94 -V101 0.0733551532192047 T149 -R154 0.0728054520867953 A96 -W104 0.0708648412175923 L103 -L137 0.0687972903701812 V144 -T150 0.0686745150919678 F106 -L137 0.0680855489704704 L94 -I146 0.0625742759239296 A96 -R154 0.0622925773397265 A93 -I147 0.0591913674903835 L94 -K152 0.0579097867541618 I105 -A141 0.0551991220248791 W148 -V156 0.0551547578690652 A96 -W148 0.0538442584810381 N91 -I146 0.0538377474594307 L92 -I146 0.0537078036646272 I97 -W148 0.0526259656991397 L94 -R154 0.0492049226200608 A99 -A141 0.0485082164252901 A93 -V156 0.0485009121915958 L92 -I147 0.0483660473363727 S95 -I147 0.0476720236480619 A96 -I147 0.0464347529197813 L103 -I136 0.0431453225342504 T150 -V156 0.0403022031812572 I105 -S142 0.0401203503783014 F106 -A141 0.0387231207967647 I102 -V139 0.038343238918829 L94 -I147 0.0379396274442634 L137 -S142 0.032069866599814 L103 -W148 0.0306639093425521 F106 -L135 0.0284234854560728 L137 -F145 0.0251310814052546 L103 -F145 0.0187584832040766 D98 -S142 0.0187069354062847 I105 -V144 0.0175651695625891 L103 -L135 0.0173547386243946 I136 -V144 0.0165749787458625 A99 -F145 0.0163069889729033 S95 -K152 0.0132286401045669 I97 -F145 0.0118349189626521 I143 -T150 0.0118139617814439 A93 -K152 0.0110766289660119 A96 -I143 0.0105649646146073 S95 -T149 0.00995039294415534 A141 -T149 0.00789732048096159 V101 -V139 0.00763933841068543 D98 -I105 0.00545258202025423 A96 -F106 0.00333126700966169 L103 -T149 0.0032573249615091 A93 -I146 0.00236731619756018 W104 -W148 0.00224043980431787 F106 -A138 0.00193553076194775 A138 -I146 0.000190138139323004 C100 -A141 -0.000820482552124968 I102 -S142 -0.00220868723227063 I107 -F145 -0.00398346060972443 V101 -I143 -0.00452717225533217 W104 -L137 -0.00556162477231936 T150 -I155 -0.00591757091072154 V101 -A141 -0.0062269447234794 I102 -F145 -0.00722596252386687 L92 -I97 -0.00774127826341697 V101 -T150 -0.00785229936948806 L103 -V144 -0.0117680064335062 C100 -A140 -0.0125007118296814 L94 -T150 -0.0132464562037136 I97 -I143 -0.0152180514939468 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