[Mon Aug 29 17:10:50 2016] >Input file: TMH7BZY7M1G.pdb >TM segments: 48-61 MAIDEN score = -4.6078 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S50 -S60 0.227509770170776 G52 -A59 0.198634364496914 F48 -V53 0.141517739887144 L55 -S60 0.109452616082024 V53 -L61 0.106085626323734 L51 -L61 0.0987826536358756 G52 -S60 0.0821158292367237 L51 -A59 0.0583655718937859 M49 -T57 0.0495706095941861 G52 -L61 0.015464406720282 M49 -F58 0.00965290782264683 L51 -T57 -0.0144914173944386 L56 -L61 -0.0407592504975973 S50 -F58 -0.0568419632973522 L51 -S60 -0.0596419704981002 S50 -A59 -0.0712886990725679 F48 -G54 -0.0745580578770042 F48 -T57 -0.0918452496061208 G52 -F58 -0.106835418771407 F48 -L56 -0.108904102171495 F48 -L55 -0.111018105738328 G54 -S60 -0.130686297422692 S50 -L56 -0.151849178803568 L51 -F58 -0.184369123066442 V53 -F58 -0.216161027675903 S50 -T57 -0.241128039042847 M49 -L56 -0.29027822589653 M49 -G54 -0.319624448570033 V53 -A59 -0.340875531854498 G54 -L61 -0.343271310049659 S50 -L55 -0.350235595100996 L55 -L61 -0.351676963008948 V53 -S60 -0.361958329293052 G52 -T57 -0.36210173784832 L51 -L56 -0.391082009636395 M49 -L55 -0.459342751639019 G54 -A59 -0.474116618005683