[Mon Aug 29 17:11:31 2016] >Input file: TMH7C390M1G.pdb >TM segments: 86-103 MAIDEN score = -2.4049 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E92 -P98 0.430435993273888 E92 -C100 0.396749461751853 H86 -S93 0.348950063023284 L91 -P98 0.222323349990643 G97 -Y102 0.174285464169558 P98 -S103 0.170343675553141 L96 -Y102 0.146614577986824 S93 -C100 0.138351900237913 H86 -A94 0.137259308861525 L95 -Y102 0.130816422669113 L91 -Y99 0.126154865971521 E92 -Y99 0.0666577526831793 I89 -G97 0.0488163869763234 A88 -L96 0.0276321475569601 A90 -P98 0.0220868443872329 F87 -E92 0.0185077699057867 L95 -F101 0.0183911561532302 A88 -G97 0.000485042707537353 A94 -F101 -0.00937619558072278 A90 -G97 -0.0271274596979003 A94 -C100 -0.0345743366124172 I89 -L95 -0.0426320217841001 F87 -S93 -0.0851880710094275 H86 -L95 -0.0875029520993129 L96 -F101 -0.0919633078053059 H86 -E92 -0.100885591702837 F87 -A94 -0.103985367658163 F87 -L96 -0.124976270637148 A90 -L95 -0.133694277386665 E92 -G97 -0.156698550179301 F87 -L95 -0.159942551196401 A90 -L96 -0.160733590201622 A94 -Y99 -0.230805665365448 S93 -P98 -0.239219070879064 A88 -A94 -0.24266246448498 L91 -G97 -0.264243337296669 S93 -Y99 -0.265030591538529 A88 -S93 -0.279572875873907 I89 -A94 -0.284402826332103 H86 -L91 -0.308463648133483 I89 -L96 -0.315975674878288 A88 -L95 -0.316723692726268 L91 -L96 -0.41739130544716 L95 -C100 -0.546040314761854