[Mon Aug 29 17:12:27 2016] >Input file: TMH8FPW2M1G.pdb >TM segments: 420-439_ 499-536 MAIDEN score = 11.8473 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D514 -L523 1.23503737550912 V507 -D531 1.20847294883787 E420 -H425 1.03755441041072 H505 -L534 0.945051679983269 L504 -L534 0.889314601750105 F430 -H500 0.873125072604825 L508 -H532 0.833246231652813 E512 -D524 0.791086648737161 D503 -L534 0.788932088651223 V507 -V530 0.787698201328196 H505 -D535 0.774787323658815 L504 -D535 0.773255355066038 A431 -P436 0.75812020758741 L506 -H532 0.749195289176955 D514 -V521 0.736339138172005 L433 -H500 0.724590789262185 L508 -V530 0.709223636467553 L506 -L534 0.70318966704461 L523 -I536 0.665458349510802 D503 -H532 0.64171930707441 P510 -A527 0.616861467402965 D429 -H500 0.596825839408288 V521 -I536 0.595499644399336 P510 -G525 0.592264499084418 D511 -A527 0.584524225136807 G423 -R502 0.580600371033512 A431 -F499 0.579167198405964 V424 -R502 0.535944068307472 P510 -G529 0.522294785057884 P516 -L523 0.514106283280871 G509 -P528 0.503994073412871 E512 -P528 0.475695536922347 A515 -R522 0.467170006963428 H505 -H532 0.4509052370945 P516 -L534 0.437211286907719 T432 -T438 0.436188569021763 S435 -H500 0.392239293477252 L433 -R502 0.369637795053301 P427 -S435 0.364577549092743 L506 -V530 0.360731284592243 L433 -A501 0.355314846023249 D511 -A526 0.347448980504068 E512 -A526 0.346359245309207 N513 -R520 0.335205266541859 H500 -H505 0.33154878027286 R502 -D535 0.325864454332415 A515 -R520 0.325466018911879 A426 -A431 0.319166003168462 V517 -D535 0.311453561044753 R522 -I536 0.311352067167675 L508 -D531 0.308745885950148 V424 -D429 0.29117123429334 G423 -H500 0.276591028098599 G525 -D531 0.271394036944418 L506 -D531 0.26973705185333 R522 -D535 0.269505960524941 V507 -D524 0.249716317578428 H505 -P516 0.24616719392297 R520 -D535 0.244808644811526 D514 -D524 0.242935902486874 L504 -P516 0.239412294193288 L506 -G533 0.234087402051639 H505 -G525 0.228930142176247 G434 -L504 0.228016749747093 V517 -I536 0.227047904896361 V507 -G529 0.22660156921732 E512 -G529 0.223228791942267 P516 -H532 0.222022213272395 D503 -G533 0.22187109767813 V507 -D535 0.218401996389725 R518 -D535 0.217166558707613 A426 -R502 0.21168595750692 V517 -L534 0.209933273320192 L433 -D503 0.209490836136981 R518 -L534 0.208161959563634 G509 -V530 0.207968836365303 P427 -H500 0.207330162354927 L504 -G533 0.206687066355521 Y439 -H505 0.195965984621904 R520 -I536 0.194357478356036 H505 -G529 0.193072970203411 A426 -G434 0.189975932095052 D514 -R520 0.189724661412059 G509 -A527 0.188673987171093 L508 -P516 0.188045638338576 Q422 -G434 0.187685491133277 P436 -L504 0.179489739710232 G423 -H505 0.176529575849564 A515 -L523 0.175083232643765 T438 -H500 0.170735931013086 G423 -T432 0.169246020960393 P427 -R502 0.168885048192223 A431 -R502 0.168392761040566 P436 -L506 0.167694006653206 A527 -G533 0.167016384656658 G423 -D503 0.16580977351252 N513 -L523 0.162290646272684 E437 -H532 0.162222698393045 G423 -G434 0.16188890677363 V521 -H532 0.159964606575598 L506 -N513 0.159509109571613 E420 -A428 0.158450240377375 D511 -V530 0.158394609966082 G509 -L523 0.157449863537398 P427 -P436 0.15736008311906 G423 -D429 0.152043548763755 P510 -D531 0.151051911011328 N513 -D535 0.150932189037269 A431 -E437 0.150764090433574 N513 -L534 0.149377203539713 D514 -V530 0.148475866981081 D514 -H532 0.14713128166816 A526 -D531 0.147011979257771 Q422 -A501 0.145908075121833 Q422 -A431 0.145902440950488 D511 -G525 0.144748527210685 G525 -G533 0.144708913832735 A431 -H505 0.142766873716512 P510 -L523 0.138570366808313 D429 -D503 0.137815799496852 N513 -D531 0.136045413742099 T438 -L504 0.133955643459931 A515 -D535 0.133672587866481 V507 -D514 0.131378277161428 L433 -L534 0.131142955522142 V507 -H532 0.129834459531555 V517 -L523 0.128872115134968 Q422 -H505 0.128617041490516 D511 -D531 0.127508683319601 D503 -D535 0.123893692374065 N513 -A527 0.123569115508253 Y439 -F499 0.1231512926986 T432 -H505 0.122912219561299 G434 -F499 0.122600674473944 A527 -H532 0.122187658853538 L506 -G525 0.121837462469554 L433 -G533 0.119389477588389 R518 -G533 0.118705368136698 T421 -P427 0.117583767529148 A428 -D503 0.116468049948211 P436 -R502 0.114640650955755 T432 -G533 0.110318713742275 T438 -V530 0.109720482968141 L508 -G525 0.106716050574713 D511 -D524 0.106069432271621 A501 -G533 0.105135580370467 V424 -G434 0.104251662619739 V517 -G533 0.103418298922559 L523 -D531 0.103234410819005 P427 -L504 0.103162741387678 L433 -V507 0.102797559557569 G434 -R502 0.102731324014427 T421 -D503 0.100912342512393 A426 -S435 0.100049486302763 T432 -E437 0.0988241181129959 G509 -A515 0.0988151764174443 H505 -A515 0.0984024183868932 E512 -R522 0.0970247335671237 G434 -H500 0.0952692263484343 A515 -D524 0.0939134495599747 A431 -T438 0.0938490377039107 G509 -D514 0.0927048569875204 T432 -L504 0.0923666005325181 T432 -F499 0.0920890300314321 A428 -S435 0.0899607814355079 D514 -A526 0.0881395100162141 V507 -L523 0.0868023903844679 V521 -G533 0.0858380106401029 D524 -V530 0.084799657155239 T432 -V507 0.0836226076654025 R518 -L523 0.0810149413106327 L504 -V530 0.0780584339004002 Q422 -G533 0.0779203320900956 N513 -I536 0.0774044430835613 P516 -V521 0.0758432361802592 S435 -D503 0.0756473066723657 L523 -V530 0.0750293509265504 D503 -F519 0.0749936698911693 V530 -I536 0.0749400113326677 A526 -I536 0.0747909232878023 L508 -A515 0.0746299666448307 D429 -G434 0.0742795539226115 L506 -V517 0.0735688104036629 D503 -I536 0.0731095365300114 G423 -G533 0.072936706516582 D524 -H532 0.0728041807924109 E437 -D531 0.0723986784434212 L506 -R522 0.071937694298378 L508 -I536 0.071330973159915 P427 -L433 0.0705574516542491 A426 -A501 0.0703493017471271 T438 -L508 0.0689113889078274 S435 -A501 0.0686714273682885 E512 -H532 0.0685573909148181 L504 -F519 0.0680204173421464 P516 -D524 0.0675255677566349 P510 -A515 0.066935339698059 E437 -D503 0.0666348998667359 T421 -R502 0.066025112802008 Y439 -G529 0.065706734775647 G509 -G533 0.0644093722714278 G525 -L534 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