[Fri Aug 26 17:34:44 2016] >Input file: TMI3CN72M2D.pdb >TM segments: 207-217_ 270-277 MAIDEN score = -1.0887 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A217 -A270 0.35536509242256 L213 -L272 0.121570332940521 E211 -A217 0.119596825458792 L215 -A270 0.114600093763541 L215 -S273 0.113895705394403 A217 -S273 0.106345458300087 A270 -P275 0.103302508859632 A216 -A270 0.0982717021416222 A216 -S273 0.0950156649666283 L271 -Y276 0.0793548691011008 N214 -A270 0.0588071934106127 L213 -L271 0.0558656338301748 A217 -L271 0.0530050053381474 N214 -S273 0.0528030256995657 L213 -A270 0.0470434061553557 V210 -Y277 0.0415786967219578 A208 -L213 0.0331928833763118 A212 -S273 0.0273752896384156 L215 -T274 -0.00271355493168901 R207 -N214 -0.012813824660717 A212 -L271 -0.0181056739407026 N214 -L271 -0.0338258496768774 A208 -N214 -0.0520605054887995 A212 -L272 -0.0644371932708596 A216 -L271 -0.0650794361067994 A212 -P275 -0.0665353750893132 L271 -Y277 -0.0732407177490737 L272 -Y277 -0.0901350982942528 E211 -A216 -0.100735572694683 A212 -Y277 -0.104088423249091 E211 -Y277 -0.115661603232383 L213 -S273 -0.125527750310985 A217 -L272 -0.129232803092138 R207 -L213 -0.133625553165382 R207 -A212 -0.137209063262002 E211 -L271 -0.145950616190377 N214 -L272 -0.197989173867326 L215 -L272 -0.216502040390238 A212 -A217 -0.239447853093532 E211 -P275 -0.278482909833564 L215 -L271 -0.36224353567871