[Mon Aug 29 17:33:48 2016] >Input file: TMI3CNB8M10G.pdb >TM segments: 114-131 MAIDEN score = 1.3107 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V122 -T128 1.37296413716881 V122 -D129 0.756410798064996 V122 -A127 0.727285896970645 F121 -G126 0.624659004237257 F121 -T128 0.489738022881799 V122 -L131 0.470464560302032 V122 -L130 0.341625274689664 P119 -T128 0.294100489978476 L120 -G126 0.185469153351254 L120 -T128 0.161439426221342 P119 -L130 0.149740321783106 P119 -G126 0.126861456327225 L120 -A127 0.0685633287610865 A123 -T128 0.0665964785661297 P119 -T125 0.0598099099560692 T125 -L131 0.0505054711987238 G124 -D129 0.0280083198257381 P119 -L131 0.0232430843359079 Y118 -A127 0.0188011886278483 Y118 -T128 0.0167602266765368 P119 -G124 0.0105287358639381 Y118 -G126 -0.00939227933156195 A123 -L131 -0.0146675699613064 P119 -D129 -0.042859233199785 F121 -A127 -0.0526796653324683 P119 -A127 -0.0938659749028371 Y118 -L130 -0.104357271334391 Y118 -G124 -0.104772599446584 R117 -A127 -0.119348478375432 Y118 -L131 -0.201302367954296 F121 -L130 -0.210007032301815 A123 -D129 -0.225253003061149 L120 -L130 -0.234157001479087 F121 -D129 -0.249738809969394 F121 -L131 -0.252706508758541 L120 -T125 -0.266311573274996 A123 -L130 -0.277925159784734 L120 -D129 -0.288059102787669 Y118 -D129 -0.291192795932371 G126 -L131 -0.294125472402538 G124 -L130 -0.312144165800646 T125 -L130 -0.324565402065228 G124 -L131 -0.342205166141802 L120 -L131 -0.421247767372801