[Fri Aug 26 17:35:35 2016] >Input file: TMI3CNB8M4D.pdb >TM segments: 60-74_ 120-128_ 136-161 MAIDEN score = 21.6636 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K61 -K149 2.08856890387268 I66 -L146 1.5389347723098 A145 -V156 1.38383388096694 L65 -V147 1.32872205410706 W70 -F143 1.10408751188042 F143 -Y157 1.03289440970258 T144 -L158 1.03257852383285 I66 -V147 0.996220908224524 L65 -K149 0.965227381060542 F69 -F143 0.903427865869191 L65 -L146 0.833778120489665 L146 -L158 0.823042907941137 N68 -T144 0.816824542485162 A145 -K154 0.779699794582369 W70 -L141 0.748992520459131 P64 -K149 0.709000281208025 I66 -T144 0.685855230254671 L146 -Y157 0.667433797228227 Y60 -L65 0.645963759109775 F69 -L141 0.627918533299605 C74 -L141 0.603222979713745 A138 -F143 0.598642351681167 F69 -T144 0.567456117267645 F143 -L158 0.555055282206712 A145 -V153 0.548150226275064 L146 -V153 0.542125187743203 F69 -P142 0.541470967766333 P64 -L146 0.501007144409135 K63 -G148 0.490247626208342 V147 -V153 0.478921907298588 T144 -V156 0.468340342600055 L146 -V156 0.465171086668997 V67 -L146 0.460963068496007 P64 -D150 0.458678224415309 V67 -A145 0.458321292430899 V147 -K155 0.446701961886011 N68 -I161 0.43301543539792 A145 -L158 0.409055298940613 K63 -N152 0.323148182111332 W73 -P142 0.323035997012747 V147 -K154 0.314433811782347 A71 -L141 0.294704342659827 N68 -A145 0.290160788575547 L65 -A145 0.280207067947534 N68 -C74 0.278355299019618 C74 -P142 0.269652412782786 T72 -T125 0.266183712981777 Q137 -P142 0.262531095472262 P64 -T144 0.259877901155084 K63 -G151 0.259609354644844 V147 -V156 0.254790376348737 W70 -P142 0.243499062562927 F69 -G139 0.241979070421396 Y60 -V153 0.24000832579008 Y60 -K149 0.23518979987717 L120 -T125 0.229750125690963 N68 -P142 0.228173313052404 W70 -G124 0.216333639186321 P64 -L158 0.213434969124396 N68 -L146 0.211558244476045 D150 -K155 0.208807100610948 A145 -G151 0.208633316129282 T128 -G139 0.208557790587738 V67 -F143 0.20808862195941 N68 -G140 0.207689533903846 V67 -G126 0.207201724081898 P64 -N152 0.206533376064969 N68 -L141 0.204331539326969 T72 -G124 0.201990445698149 N136 -L146 0.198960939790072 G62 -K149 0.19826836834383 T72 -L141 0.197470608058947 N136 -T144 0.197060211854614 L65 -V153 0.195348188529553 Q137 -T144 0.183719117713661 G126 -P142 0.179893696968815 W70 -R160 0.178384818209821 L146 -N152 0.174342502202975 T144 -I161 0.173987126627611 G148 -V156 0.171955477930628 A71 -P142 0.162292203598128 G126 -A138 0.161636831452177 I66 -I161 0.156220569097337 C74 -G126 0.154101828531401 P64 -K155 0.152994467840707 W70 -T128 0.152699466099775 A138 -K155 0.150971009878086 I66 -A123 0.150227342503456 T144 -G159 0.14902541808845 N68 -N136 0.148953301810063 K154 -G159 0.148176272652769 T72 -A127 0.147218359145675 L65 -G148 0.146690115022779 L65 -Y157 0.145667774386241 G62 -D150 0.143225674536094 G139 -T144 0.140838150000775 T72 -T128 0.140270559875539 T125 -T144 0.139971018906798 G148 -Y157 0.136409159792731 V147 -L158 0.135982765632249 L146 -K155 0.133906688211809 N68 -A138 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