[Fri Aug 26 17:36:21 2016] >Input file: TMI3CNB8M9D.pdb >TM segments: 116-149 MAIDEN score = -1.3638 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A138 -F143 0.620339147294558 L131 -Q137 0.611053912108019 D129 -F134 0.442061059887027 N136 -P142 0.338848452122342 T125 -L130 0.32425118457044 G135 -A145 0.310068157481128 A123 -L131 0.282675749264881 Q137 -P142 0.252442404282649 A123 -L130 0.25055668838066 A123 -R132 0.243175333057944 G124 -L131 0.227539421374363 Q133 -G139 0.226729858975778 V122 -D129 0.205975306384931 V122 -L130 0.177303365456909 G124 -D129 0.162070215249723 L131 -P142 0.161987280345558 G126 -L131 0.158924787542475 G135 -T144 0.149838513655702 L131 -A138 0.148322804691696 R132 -A145 0.141388714966696 L130 -N136 0.135947777283218 L130 -G139 0.125538742155669 D129 -G135 0.121618790897212 F121 -G126 0.119357650584348 R132 -P142 0.114339363428123 G135 -G140 0.114176473839529 A127 -G139 0.106534713620607 G139 -A145 0.102506378989621 L141 -L146 0.102309644469513 A127 -A138 0.101313233390727 L131 -G139 0.100177878762633 G139 -T144 0.0991645319727758 G126 -A138 0.098537501522278 L120 -A145 0.094171583437598 Q137 -L146 0.0929818152939403 F134 -G139 0.0891935529615129 A123 -F134 0.0890862869526226 T128 -G135 0.0887000997683056 T125 -R132 0.0873061125573829 G135 -F143 0.0834417689108697 Q133 -A145 0.0826697360697626 F134 -F143 0.0768626667888359 N136 -V147 0.0706201532488654 P119 -A145 0.0703770452328945 L131 -N136 0.0692518516052725 G140 -A145 0.065730865567029 Q133 -F143 0.0651893491867561 F134 -T144 0.0625598556735139 R132 -T144 0.0616821285804747 A127 -G135 0.05985167534646 A123 -A138 0.0566863565353808 L120 -F143 0.0554529324913018 G135 -V147 0.0522321880129211 A123 -Q133 0.0521023980236545 L130 -A145 0.0507345122928391 F121 -T144 0.0487871808652862 G126 -Q133 0.0428448871156251 A127 -Q137 0.0391889220823325 P119 -L146 0.0389800717035742 A127 -N136 0.035962110233452 R132 -G139 0.0334939391709987 T128 -G140 0.0334477896492045 N136 -T144 0.0315974377213859 V122 -T128 0.0255941190960391 V122 -A127 0.0207282879700124 F121 -T128 0.0140463313640158 R132 -G140 0.0105963860176049 G126 -G139 0.00945790775585298 V122 -Q133 0.00919160746047831 Q137 -A145 0.00711299795626275 A123 -N136 0.00331560849521573 T128 -N136 0.00324176664607467 D129 -G140 0.00302945024857176 Q133 -G140 -0.00181086960522592 L130 -A138 -0.00279763355592899 G135 -L141 -0.00360214177574825 L131 -A145 -0.00602945090171225 D129 -G139 -0.00728643694753628 A127 -R132 -0.00747359857134233 A123 -F143 -0.00937619558072278 G126 -Q137 -0.0110502686732317 P119 -T144 -0.0117143445813097 N136 -F143 -0.0171717790339354 D129 -N136 -0.0189024766488832 L120 -T144 -0.0206365387269218 T128 -Q137 -0.0228936890593613 L131 -T144 -0.0280073230196667 F121 -D129 -0.0309926433008849 G124 -Q133 -0.0316074096057557 G126 -F134 -0.0327801568666275 Q133 -T144 -0.0344463244556581 F121 -A127 -0.0404303270498554 V122 -A138 -0.0526831051892822 P119 -V147 -0.0537219470184764 Q133 -A138 -0.0545478287933437 L130 -G140 -0.05486242171692 I116 -F121 -0.060147060669753 L130 -T144 -0.0622970310660595 N136 -L141 -0.0632165341233275 A138 -L146 -0.0644091034533307 N136 -L146 -0.0675225634226441 L120 -G126 -0.0691169906203006 T128 -Q133 -0.073816525846115 L130 -P142 -0.0742271731647257 R132 -F143 -0.0748448179519396 L130 -F143 -0.0777792143314477 L131 -F143 -0.0783937130736163 G124 -R132 -0.0793205040430154 A123 -T128 -0.0828022745428602 T128 -L141 -0.0870132221308237 L120 -L131 -0.0888162150137024 G135 -L146 -0.0991541864524406 A127 -Q133 -0.100943044805713 D129 -Q137 -0.103226888902767 F134 -A145 -0.103536621013404 F121 -R132 -0.103551233705746 A138 -T144 -0.104586602395905 I116 -V122 -0.106207513869347 A127 -F134 -0.108765883228859 T128 -F143 -0.108945757861766 D129 -F143 -0.109229320567584 Y118 -L146 -0.116166391321878 F121 -L130 -0.117610183934601 A123 -D129 -0.118378397763526 L120 -L130 -0.119944754816377 F121 -L131 -0.120145927195623 F121 -Q133 -0.129884359673447 F121 -F143 -0.137873554661686 R132 -L141 -0.141784587146002 T125 -Q133 -0.14266141184339 L130 -L141 -0.151056329571897 G126 -N136 -0.155173664514475 V122 -R132 -0.163856173143122 A138 -A145 -0.172690115545887 L130 -G135 -0.177011229789272 L131 -G140 -0.17734918261181 F121 -A145 -0.178147252743298 Q137 -T144 -0.19115062952323 L131 -L141 -0.191915274915496 G126 -R132 -0.206644172273338 D129 -A138 -0.221286311645042 N136 -A145 -0.224024074178565 T128 -F134 -0.232520226864385 T128 -G139 -0.236227963086476 V122 -L131 -0.259907238769429 T128 -A138 -0.264096661918322 T125 -L131 -0.268003031967747 Q137 -F143 -0.381775094991156 G124 -L130 -0.403195651159545 L130 -Q137 -0.475893079285338 R132 -A138 -0.617829608870623 R132 -Q137 -1.02745296685295