[Mon Aug 29 17:43:47 2016] >Input file: TMI6L8K4M1G.pdb >TM segments: 26-33_ 58-65_ 163-178 MAIDEN score = -0.5469 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L63 -I169 0.810475939568292 L63 -R166 0.614390191549679 L63 -S167 0.533013439053901 L63 -K171 0.481295370431428 R62 -I169 0.474089378122443 I65 -E168 0.395277355316776 I65 -I169 0.392311214296238 L63 -T172 0.380932980201413 K58 -Q175 0.34762564867067 S167 -T172 0.341308825694351 L63 -I170 0.305115867869992 K61 -T176 0.261054245678195 R62 -I170 0.255075811569359 K60 -S167 0.244360064320383 S64 -T172 0.240520034031772 K61 -E168 0.237039286842523 K61 -T172 0.194961313842139 A164 -E174 0.194511982127597 R62 -D177 0.17921998031305 L63 -E168 0.168881369201269 K59 -T172 0.162548997930484 D165 -T172 0.16158617585953 K58 -T173 0.156510754173046 K60 -K171 0.149358440102046 R62 -E168 0.148127843359757 S64 -R166 0.141595602020776 K58 -V178 0.134997479600512 N30 -S64 0.134471000386336 R62 -S167 0.132853755818298 I65 -T173 0.129311022735941 K61 -V178 0.102558386197503 L63 -A164 0.0954914115295145 S29 -S64 0.0952862775298842 L63 -E174 0.0897454936813491 D165 -T173 0.0878110736766349 R62 -T176 0.0857915447372855 R166 -T176 0.0729774541923479 S64 -I170 0.0716825521800697 L63 -Q175 0.0685433909565152 R62 -R166 0.0622812141086504 R62 -A164 0.054193454383201 I65 -R166 0.0531779750596488 K60 -E168 0.0505730204561381 R166 -K171 0.0467303627479216 S64 -I169 0.0377441761768544 N31 -S64 0.0368088951188685 V32 -S64 0.0361523305994478 R62 -Q175 0.0346116734042403 K60 -V178 0.0345906831336303 R166 -Q175 0.0311166637913041 S64 -S167 0.0162658983201345 K60 -T173 0.0112520964129925 K60 -T176 0.00988576250681383 K61 -D165 0.00898578378817261 R62 -D165 0.0078779741808539 S167 -E174 0.00401977700119682 S29 -L63 -0.000824556715682604 S167 -T176 -0.00187778527509952 K59 -D177 -0.00292055906764563 I65 -I170 -0.00824608846284569 D165 -T176 -0.00861851377507339 E168 -Q175 -0.00997399264653898 S167 -Q175 -0.0127127942127219 K60 -D177 -0.0147904622779915 K59 -V178 -0.0159936196203381 D165 -E174 -0.0243704672523717 K58 -T176 -0.0246944509770424 K61 -I170 -0.0254795576694482 K58 -E174 -0.0276351550144129 I65 -D165 -0.0288771882025562 K59 -T176 -0.031062426293012 S29 -I65 -0.0322956218219088 K61 -T173 -0.0324623675899635 L63 -D165 -0.0325952452942062 K59 -E174 -0.0360845186388237 A164 -T173 -0.0424822509653972 A164 -T176 -0.0426878991173961 A164 -T172 -0.0431731818265552 R166 -E174 -0.0490991108482819 R62 -E174 -0.053701319724665 K61 -S167 -0.0559669525949828 K60 -R166 -0.0571939001076469 S64 -K171 -0.0714509052912522 V32 -I65 -0.0752706155719371 S64 -E174 -0.0795842746954154 K59 -S64 -0.0885811509887877 R166 -T173 -0.0911826594850176 K60 -I169 -0.0923592280249101 D165 -Q175 -0.0928415154132446 V32 -L63 -0.0984866046800921 A164 -Q175 -0.100277129202519 A163 -E174 -0.100735572694683 L63 -T176 -0.105947469524047 N31 -I65 -0.12288196564089 K59 -Q175 -0.123748034848501 K60 -I170 -0.125013160667024 K61 -K171 -0.126229713558758 N31 -L63 -0.126781271147726 K61 -A164 -0.127995712630399 K61 -R166 -0.13028697053938 E168 -T173 -0.147225400243813 K61 -Q175 -0.150756649912505 N30 -I65 -0.150821271476278 K59 -R166 -0.155712371678442 K61 -D177 -0.159577816252413 R62 -T172 -0.16191038368044 R166 -T172 -0.1654735271083 E168 -E174 -0.177553691068408 K61 -I169 -0.179743198367922 I65 -S167 -0.180462955666072 I169 -E174 -0.191616333307523 K60 -T172 -0.197208102932581 S64 -T173 -0.216174380884047 I65 -T172 -0.21862649534525 K59 -T173 -0.219652337572268 S64 -E168 -0.240397253940721 R62 -K171 -0.27281275914073 V32 -R62 -0.279951791243215 K59 -K171 -0.284453975928482 S167 -T173 -0.287037107280507 L63 -T173 -0.306798627095608 I65 -K171 -0.338027244428837 K60 -E174 -0.362146558495859 R62 -T173 -0.457453523616013 K58 -D177 -0.62057902517229 K61 -E174 -0.799415671675052 K60 -Q175 -0.838841527600851