[Fri Aug 26 18:00:28 2016]
>Input file: TMI9LJ08M1D.pdb
>TM segments:  529-539_ 555-580

MAIDEN score = 2.7407

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
M564 -E570 		4.6272934642426
L563 -R572 		1.82027758624279
M564 -V571 		1.37282164120334
L561 -T576 		1.11006022731632
L563 -E573 		0.941092213115591
L563 -V571 		0.740950962193523
V555 -T560 		0.713917399666176
P558 -G578 		0.591984963455186
L561 -R572 		0.555236161886545
I562 -E573 		0.549645036791874
E570 -T576 		0.443116219910953
T560 -E573 		0.434575731539115
D538 -V555 		0.335070009550502
G568 -E573 		0.330987373215157
R536 -L561 		0.329227791499171
G557 -E579 		0.297378379243439
I562 -R575 		0.296720788590057
I562 -V571 		0.29167514925482
I562 -G574 		0.28697939898772
D538 -V556 		0.273748805068968
I562 -E570 		0.266115495018731
M564 -G569 		0.221889902765199
R536 -M564 		0.220778418323631
R565 -E573 		0.220294938466676
T560 -T576 		0.213029432922173
V555 -L561 		0.207678347911545
L561 -E579 		0.207014322883849
P559 -G574 		0.198195069096627
L563 -R575 		0.193380170446613
P559 -T576 		0.177896770953675
P558 -R575 		0.173841841395242
S533 -L561 		0.165507282210228
D538 -T560 		0.164847163544855
A531 -R565 		0.163330477524579
T560 -E570 		0.159144085369559
P558 -E577 		0.154975458683511
R536 -P558 		0.151506992940706
R565 -E570 		0.147192427408571
R536 -R575 		0.122159972520537
A537 -G557 		0.115876362815491
L561 -E573 		0.113738637770767
V539 -G557 		0.107463860019576
G557 -G574 		0.106387062296212
D538 -L561 		0.105151834064107
G557 -T576 		0.100515668552696
I562 -G568 		0.0989720297775563
M564 -G574 		0.0978229643413737
L529 -L563 		0.0973298175914001
V555 -L563 		0.0961921721482788
A537 -L563 		0.0918310488941263
V532 -D567 		0.0917380568021651
A537 -V555 		0.090209557262115
M564 -E577 		0.0896402861130576
A531 -V571 		0.0884490020574611
V556 -G578 		0.0883759070224901
I562 -E579 		0.0871263591797478
V532 -L563 		0.0853845097181694
P558 -T576 		0.0843730314138851
R536 -E577 		0.0836542362370958
T560 -R575 		0.0827810378088285
L563 -G574 		0.0820045859878838
E570 -E577 		0.081063198116897
R565 -G574 		0.0807916486145299
L561 -V571 		0.0790460519167988
G569 -G574 		0.0754179719755945
A531 -M564 		0.0746678544067427
M564 -T576 		0.0737713769796928
I535 -T560 		0.0733496828855014
S533 -R565 		0.0700722194428892
P566 -V571 		0.0698898795474373
V534 -R565 		0.0687743400441683
G557 -I562 		0.0674737837043935
E570 -R575 		0.0662709551728335
R536 -L563 		0.0660005724540422
V556 -R575 		0.0638414072815725
V571 -T576 		0.063573944091232
V532 -L561 		0.0592672504589036
A537 -R575 		0.0549976268706058
A537 -I562 		0.0535563136932335
V539 -G578 		0.052018817041174
R565 -R572 		0.0490516115338389
P566 -R572 		0.0487999895829576
V534 -R572 		0.0456581694722755
V532 -R572 		0.0448202414361805
V532 -G569 		0.0402625663897958
P559 -E579 		0.0322212727025126
V556 -I562 		0.0311306986249491
A537 -T576 		0.0299446613175742
A531 -P566 		0.0283355901006139
I562 -L580 		0.0276772433436454
A537 -M564 		0.0257491317657519
R536 -V555 		0.0250065571624329
V555 -R572 		0.0246109580959679
I562 -G578 		0.0235632075784353
I535 -P559 		0.022764498871414
L563 -L580 		0.0210947067250711
G574 -L580 		0.0202292935688557
I535 -R575 		0.0194622863281579
V555 -E573 		0.0193025340425299
V555 -E570 		0.0165828473001472
G557 -L580 		0.0118039552331455
V534 -T560 		0.0112744103948814
V534 -P566 		0.0107375019455741
S533 -E570 		0.0103593967842923
S533 -D567 		0.00960167721700464
V534 -L563 		0.00886056821719272
V532 -G568 		0.0072125491804762
T560 -R572 		0.00703899660369611
G569 -R575 		0.00660171540122284
T560 -G574 		0.00456151501984303
I535 -P558 		-0.000866784058274561
V556 -G574 		-0.00137745968978109
L561 -G568 		-0.00144142860431862
D538 -G557 		-0.00488248060586072
D567 -E573 		-0.00565984091724614
I535 -P566 		-0.00594166323397705
R536 -P559 		-0.00791916230119583
G574 -E579 		-0.00798186062037587
E573 -G578 		-0.0101806984321255
L561 -G569 		-0.0103688978461052
V555 -E577 		-0.0107266012362999
V539 -P559 		-0.0120264279423674
I535 -T576 		-0.0135741300878514
V532 -I562 		-0.0157000114415293
S533 -G568 		-0.0167949995968472
G557 -R575 		-0.0179583730914088
P559 -R575 		-0.0179730184092017
R572 -E577 		-0.0207846512556435
S533 -I562 		-0.0209437736734523
V539 -I562 		-0.0214427556091308
A537 -V556 		-0.0220311654143601
I535 -R565 		-0.0235684923107824
L561 -E570 		-0.0254032840549199
D567 -R572 		-0.0269603088933359
R536 -E579 		-0.0269892533507234
I562 -T576 		-0.0298780810248096
A531 -L563 		-0.0341666911233141
V534 -V571 		-0.0374966061108306
V556 -T576 		-0.0432866551138718
S533 -G569 		-0.0446988392784071
I535 -R572 		-0.0485719007587688
V555 -M564 		-0.0487236014021644
R536 -T576 		-0.049387098966011
S533 -P566 		-0.0500800766940014
P558 -L580 		-0.0526394341731855
T560 -G578 		-0.0536566986853764
V539 -V555 		-0.0541362963395375
P558 -L563 		-0.055776920123126
L563 -G578 		-0.0580358034457413
S533 -R572 		-0.059739545286299
R572 -L580 		-0.0611746603618634
T560 -V571 		-0.0623311954466317
V534 -G568 		-0.0634467562154111
R536 -G557 		-0.0640637181853965
P558 -G574 		-0.0701584643275495
I535 -V571 		-0.0727150921275488
S533 -V571 		-0.0728325033122834
P559 -R572 		-0.0757190818732569
V539 -V556 		-0.0759684282341553
V534 -P559 		-0.0773524145669952
A537 -E577 		-0.0775402474015876
I562 -D567 		-0.077670211870446
A537 -P558 		-0.0779088715401457
R565 -R575 		-0.0782191709261663
K530 -I535 		-0.0796386737168477
L563 -E577 		-0.0816797841080308
L529 -I535 		-0.0925330076570157
V555 -G578 		-0.0940365085874744
V532 -V571 		-0.0956389757527693
A537 -E570 		-0.0972354595802143
D538 -I562 		-0.0996586197392522
V556 -L561 		-0.100367126179787
M564 -E573 		-0.101933429056436
A537 -T560 		-0.105214080371967
I535 -G568 		-0.108580428959152
V556 -E579 		-0.109006382162445
V556 -E573 		-0.113597699870385
V571 -E577 		-0.113728890508862
V555 -E579 		-0.124693548206153
A531 -D567 		-0.132108629571353
G557 -E577 		-0.132415918567175
I562 -R572 		-0.135617113292203
L563 -E579 		-0.14121650342689
V534 -T576 		-0.143233374062921
R536 -T560 		-0.143272849053055
L561 -E577 		-0.146517070629815
R575 -L580 		-0.148212303774
L563 -T576 		-0.148927096631303
V555 -G574 		-0.156182618421167
I535 -E570 		-0.158038036152318
T560 -E579 		-0.15808334470719
V532 -R565 		-0.159409431417043
G568 -R575 		-0.160658688537453
V539 -L561 		-0.16209866292196
A537 -P559 		-0.166303014955917
R572 -G578 		-0.171554025211875
V555 -R575 		-0.172070180267653
P558 -E579 		-0.173214642570945
V539 -P558 		-0.17391625751661
V539 -E577 		-0.174937809223593
M564 -R572 		-0.176895440826638
P559 -E577 		-0.177672760583369
L561 -G574 		-0.177896472977248
V539 -T560 		-0.182686296792183
V534 -E570 		-0.187974314044372
S533 -M564 		-0.192289873231096
V532 -E570 		-0.193784660367153
K530 -R565 		-0.200845268338944
D538 -P559 		-0.208932756792538
V532 -P566 		-0.214341446517906
V555 -T576 		-0.226914431152009
G557 -G578 		-0.228806521602479
M564 -R575 		-0.230778468015156
L561 -G578 		-0.231364681238407
I562 -E577 		-0.232114670333195
K530 -P566 		-0.238637918132294
P559 -E573 		-0.264228122080361
T560 -L580 		-0.267483822808883
I562 -G569 		-0.274371868390406
L563 -G569 		-0.274776851119714
V556 -E577 		-0.275583480565789
A537 -L561 		-0.281978406913016
V534 -R575 		-0.282502648692662
L563 -G568 		-0.286869369946758
P566 -E573 		-0.306136130930424
S533 -L563 		-0.323007267846775
I535 -I562 		-0.334100359476541
V534 -M564 		-0.342050563027623
V534 -I562 		-0.343015557532002
I535 -M564 		-0.346482032067776
V532 -M564 		-0.350364018269739
L561 -L580 		-0.360528835038144
R536 -I562 		-0.381367522986224
T560 -E577 		-0.391323825221889
V534 -L561 		-0.39557309459107
I535 -L561 		-0.402127064165375
I535 -L563 		-0.40353002222502
D538 -P558 		-0.404223613811102
V555 -I562 		-0.445271824836459
L529 -V534 		-0.454773282659093
P559 -L580 		-0.477710344357469
L561 -R575 		-0.511082245239876
L563 -E570 		-0.54530249792826
P559 -G578 		-0.609869183821446
R565 -V571 		-0.704035173373783