[Mon Aug 29 16:39:49 2016] >Input file: TMJ8TAV6M1G.pdb >TM segments: 203-234_ 279-308 MAIDEN score = -12.4653 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V279 -V284 0.786102531287188 V279 -G290 0.681191929452892 G283 -V288 0.647280844233769 I208 -A213 0.622396754301793 S207 -R212 0.600005335439513 V280 -A285 0.589856921734972 F303 -M308 0.579224261478499 A213 -T218 0.503955188597572 V289 -A294 0.502882319427476 V279 -A285 0.495798283427392 A285 -V291 0.456294517937587 L209 -F214 0.45239437119878 A206 -R212 0.378769785402419 A285 -A292 0.37447926387947 V284 -G290 0.346767058820089 G283 -A292 0.322015863399504 P204 -K210 0.318225082080225 V279 -V291 0.30920329998892 R212 -T218 0.308881368180921 V288 -V293 0.256128429855855 C221 -T229 0.25427871412869 L205 -S211 0.253658151456405 A213 -S220 0.229198678093972 V289 -G297 0.221024678601872 A285 -S296 0.215332155735168 V284 -V291 0.207505573914607 S207 -S220 0.207482577934675 I208 -V215 0.205936254273775 C286 -G297 0.204803965099044 S211 -G217 0.203557782913244 L298 -M308 0.202816722014772 V227 -S234 0.175856039412751 S222 -L230 0.172547827297037 G290 -L298 0.16607649443471 G283 -A294 0.163444091003377 A285 -G297 0.160397037361703 G290 -G297 0.159864683587457 F300 -F305 0.147043136861434 F214 -S222 0.143672208115198 V280 -V293 0.13405351292124 S211 -S222 0.130523190312653 I282 -G290 0.124384684309108 G224 -M232 0.119871315121441 K210 -V215 0.117856982412437 L298 -A306 0.11569054792894 A285 -L295 0.113879173929546 G283 -V293 0.109998896466194 H302 -M308 0.108232965491679 K210 -L216 0.107890994797074 N287 -A292 0.107425130632952 C286 -S296 0.105524707275373 S296 -A306 0.103007877711108 V226 -S234 0.0988800602354702 A292 -H302 0.093837716011774 L298 -L307 0.0923240449449754 G297 -L304 0.0922936015884588 V284 -L295 0.091875947733453 I282 -V291 0.0899003464034843 V226 -N233 0.0878800004661141 S220 -T229 0.0843531160433789 S222 -T229 0.0824363622488118 S207 -T218 0.0809955013888323 L295 -L304 0.0799790257337181 V279 -L295 0.0787179408568597 V280 -N287 0.0784864411218327 S207 -V215 0.0766866734961562 V288 -L295 0.0749353880326276 A281 -A292 0.0727647719108289 T229 -S234 0.071925371007084 A206 -S220 0.0716778035763577 V279 -V288 0.068324298734737 N287 -V293 0.0660314879945116 P204 -F214 0.0644082041364724 G297 -F305 0.0622049801852382 L209 -V215 0.0607539856500505 V279 -N287 0.0598313327863802 A281 -N287 0.0592513898572793 I208 -S220 0.0550986731702587 V280 -A292 0.0547938858597652 V284 -V289 0.0535030856324107 V288 -G297 0.0516052151027346 A281 -C286 0.0503524808480569 A281 -G290 0.0455747592486313 V223 -M232 0.0431582574257581 A294 -H302 0.0420750270492114 L216 -G224 0.0397392382700827 G290 -T299 0.0365570176410226 A213 -S222 0.0317384304021662 W301 -A306 0.0307128746146939 V223 -M228 0.0298135665058137 I282 -V289 0.0292465852890516 L298 -F305 0.0272902627614537 T299 -L304 0.0267999929014451 M228 -N233 0.0253048283327102 P204 -A213 0.0244210516226104 G217 -V226 0.023210317808668 V284 -A294 0.023078430000621 L205 -F214 0.0223136559162 A206 -S211 0.012681408840165 A213 -C221 0.00789010515709454 T299 -L307 0.00671176879615576 A206 -V219 0.00510964704213102 E203 -L209 0.00374142760600993 A281 -V291 0.00338456558031108 I282 -V288 0.0022272007377504 A285 -A294 0.00172144731811841 L216 -V223 0.000544031845214121 V284 -A292 -0.000420042023755007 L205 -A213 -0.000610411431639868 L205 -S220 -0.000870028248710547 V279 -A294 -0.00133815979682739 V215 -S220 -0.00204367268793471 N287 -A294 -0.00235596653319087 A206 -C221 -0.00411680082792332 G297 -A306 -0.00465825472261017 S296 -F305 -0.00530365000969013 C286 -A294 -0.00732535378458743 A281 -V289 -0.0073726765868477 S211 -C221 -0.00768560596311418 S296 -L304 -0.0107151813866651 A281 -V288 -0.011416266098446 C221 -L231 -0.011992306773857 L205 -G217 -0.0126681445876022 A206 -T218 -0.0145875585834272 V215 -G224 -0.0171219852299922 V284 -S296 -0.0218681789863323 K210 -S220 -0.0220490168123311 A206 -L216 -0.0222992557185178 I208 -G217 -0.0226655469937178 L209 -L216 -0.0250045261207904 A206 -V215 -0.0257325553662222 L205 -L216 -0.026757214161945 V291 -S296 -0.0303546531286703 V219 -M228 -0.0307005026033913 A292 -F300 -0.0334665745145983 C221 -L230 -0.0339048107808306 V288 -A294 -0.0347301937914795 R212 -G217 -0.0358834806816493 I282 -A292 -0.0389658427591293 S222 -V227 -0.0395171325415862 V289 -L298 -0.0411614935180644 L295 -W301 -0.0424249353950312 L216 -F225 -0.0470365285427583 G217 -F225 -0.0520815283117695 A292 -L298 -0.0540947063613073 E203 -S211 -0.056620412500958 F300 -L307 -0.0595289808139627 F225 -S234 -0.0609094096338816 L295 -F303 -0.0616274446393241 P204 -G217 -0.0645887981430506 K210 -T218 -0.065247573921451 S207 -F214 -0.0656527877144839 C286 -V291 -0.0694094429536412 L209 -T218 -0.0708220555221071 I208 -V219 -0.0740295646359828 F214 -C221 -0.0777220881464213 C286 -L295 -0.0783967363189388 T218 -V226 -0.078739902835634 V279 -V293 -0.0810448597705836 E203 -R212 -0.0812351542726075 V291 -T299 -0.0816379391271994 R212 -S222 -0.0818558308927732 R212 -S220 -0.0823629009949957 S220 -M228 -0.084587848221346 V219 -V227 -0.0847418004369462 V215 -V223 -0.0873787656299199 S211 -S220 -0.0913839605515863 S211 -L216 -0.0917808310460337 V288 -S296 -0.0935637772020481 F225 -N233 -0.0955670061296745 V280 -V289 -0.0975131945495966 G217 -G224 -0.100001291297209 S296 -W301 -0.101062697476057 T218 -V227 -0.103836639037361 A213 -V219 -0.104344993526683 G224 -L231 -0.106243205842818 A294 -W301 -0.108798759507772 A206 -F214 -0.111052237212623 G283 -V291 -0.111833502390313 G217 -V223 -0.111901981004691 V279 -C286 -0.122041132737824 P204 -L216 -0.123698204730006 V280 -C286 -0.126303589167532 C221 -M228 -0.127790867755947 F214 -S220 -0.128844989412251 T299 -A306 -0.130820176054973 W301 -L307 -0.131446385145832 V293 -W301 -0.131892948341 M228 -S234 -0.132738027699519 A294 -F303 -0.13433747958892 A285 -G290 -0.136312623935078 A292 -W301 -0.137030945903637 V227 -M232 -0.137646648762018 K210 -V219 -0.138005081520346 G283 -V289 -0.138191677136076 E203 -K210 -0.138297969910925 V291 -F300 -0.141115071354385 V291 -W301 -0.141353456557039 P204 -S211 -0.141358256895835 S207 -A213 -0.141615217386943 F214 -V219 -0.144600386919938 G217 -S222 -0.145399870279967 S207 -G217 -0.148212154666244 I208 -F214 -0.149963942854976 G290 -S296 -0.150292719993473 I208 -T218 -0.152028687730193 S222 -L231 -0.154126804359351 A292 -T299 -0.155548704233534 S296 -F303 -0.156804848751581 R212 -C221 -0.157593994707709 R212 -V219 -0.159104789422149 W301 -M308 -0.16067039486745 V219 -V226 -0.160842434017083 A294 -T299 -0.163136357423393 I208 -C221 -0.166645629798704 T218 -M228 -0.170361124993918 R212 -G224 -0.171360566878278 T218 -F225 -0.171959280548174 L205 -K210 -0.17329766185421 V223 -L230 -0.173565347472817 V219 -G224 -0.174619473216779 G297 -F303 -0.183124240078337 S296 -H302 -0.183157525957273 A206 -A213 -0.184373087808472 V223 -L231 -0.184839724535314 V293 -F300 -0.188168582591168 V291 -G297 -0.188709264628419 C286 -A292 -0.188898532535517 E203 -I208 -0.190299054567937 S222 -M228 -0.19224600145175 L205 -R212 -0.197130078862456 V291 -L298 -0.198920177516697 L216 -S222 -0.199608537509189 G224 -T229 -0.201446078930914 G297 -H302 -0.202586710052469 V280 -G290 -0.202694965616177 V289 -L295 -0.203417769671024 S207 -L216 -0.205492465929392 V293 -T299 -0.209835894064845 T218 -G224 -0.213780798974531 T218 -V223 -0.215172734756025 V223 -T229 -0.216604514315917 F300 -A306 -0.217763751809479 C221 -V226 -0.225703443238899 K210 -G217 -0.233169885595651 V289 -S296 -0.2335565545904 V293 -H302 -0.236928363233381 G224 -N233 -0.237905359684814 G283 -G290 -0.238082140728709 V227 -N233 -0.244919254590607 P204 -L209 -0.245418915559654 F225 -L231 -0.25327743190072 F300 -M308 -0.253578436510578 L295 -F300 -0.258759832197185 L295 -H302 -0.264248874628909 T299 -M308 -0.267539851346464 I282 -N287 -0.270257183419893 L216 -C221 -0.271734247886047 V279 -A292 -0.27353870870567 A294 -F300 -0.279618764958854 R212 -V223 -0.282078412061485 S220 -V227 -0.285088607170416 S211 -T218 -0.285904957827442 S220 -F225 -0.287878306208817 T299 -F305 -0.290546947330937 C286 -V293 -0.297987755140287 L209 -G217 -0.300323781623275 V215 -S222 -0.307469816264629 V219 -F225 -0.316939102020664 G224 -L230 -0.32114075146873 L298 -L304 -0.322632637869116 C221 -V227 -0.331845067907329 S211 -V219 -0.332029065545228 F225 -M232 -0.336225572920987 V280 -V291 -0.346917784270721 V280 -V288 -0.350138153447687 V284 -V293 -0.352717741138301 V279 -V289 -0.353095839318253 F225 -L230 -0.357321563062842 S220 -V226 -0.35971298824994 V226 -M232 -0.361186254982158 L298 -F303 -0.370850081851459 G290 -L295 -0.385868082368716 I208 -L216 -0.396268415430827 H302 -L307 -0.40090627411029 A285 -V293 -0.415591128468665 A206 -G217 -0.417998543953232 P204 -R212 -0.424413452219536 V226 -L231 -0.435545903781744 V293 -L298 -0.446609643748144 A292 -G297 -0.458901844869524 V215 -C221 -0.531189112204689