[Fri Aug 26 16:32:30 2016] >Input file: TMK0K4M9M1D.pdb >TM segments: 376-395 MAIDEN score = -2.4651 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V377 -M387 0.336433635386711 S382 -A389 0.306733566583945 I383 -A389 0.295984923280131 S384 -G390 0.291169210735944 G376 -S384 0.287091014194061 L386 -T391 0.195901908041017 S384 -S392 0.172838295033824 A389 -V394 0.161280323774615 G376 -L381 0.13128113009792 A380 -V388 0.124716271829286 A385 -G390 0.115952835792809 G378 -L386 0.102074609016897 A380 -A389 0.0966575501910714 V388 -G393 0.0925548528297779 L381 -V388 0.0923583471196352 A385 -T391 0.091536108901042 S382 -V388 0.091516693327844 S382 -T391 0.082213222219113 S384 -T391 0.0737573413318859 L381 -A389 0.0531608978277522 G376 -A385 0.0472457654960037 I383 -S392 0.0352537633589201 G390 -A395 0.0278944616437569 G376 -L386 -0.00145825514209263 S382 -G390 -0.00395532295492096 F379 -L386 -0.0225303508042414 V377 -A385 -0.0274621359073179 A380 -G390 -0.0293401042631727 V377 -S382 -0.0375101810038543 F379 -T391 -0.0436286907394816 L386 -S392 -0.0601066851560272 V377 -L386 -0.073958519923579 S382 -M387 -0.0853918748932503 F379 -M387 -0.0882121714676369 L381 -T391 -0.0882287269206143 M387 -S392 -0.0901983529545083 A380 -T391 -0.114070547706026 G378 -S384 -0.127846597307609 G376 -S382 -0.129997894245327 G378 -A385 -0.131606451495135 F379 -A389 -0.174638777404767 G378 -M387 -0.187021015462657 G378 -I383 -0.193164252753506 A380 -M387 -0.203720111634442 L381 -M387 -0.257550050575288 V377 -S384 -0.261706337618037 F379 -A385 -0.262275846307126 I383 -G390 -0.263934291101408 G376 -I383 -0.264222146898034 A380 -L386 -0.269968908901811 A380 -A385 -0.287213871179388 F379 -S384 -0.288672318363184 I383 -T391 -0.293827835330625 L381 -L386 -0.299286916478508 I383 -V388 -0.310320748022599 V377 -I383 -0.387896616454283 S384 -A389 -0.409777993706937