[Mon Aug 29 16:51:38 2016] >Input file: TMK1PG74M2G.pdb >TM segments: 80-99 MAIDEN score = 1.8706 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H94 -Q99 1.81123457085687 V86 -S91 0.362359825150935 Y93 -Q99 0.342418575983645 G82 -L89 0.233624679377809 S87 -Y93 0.19043747052571 F84 -Q99 0.170195050747052 R83 -P90 0.167752494746937 S88 -Y93 0.145483949651437 R83 -Q99 0.144016937040088 V86 -H94 0.140510876181854 S91 -Q99 0.11092875617394 G80 -L85 0.0895797786558461 G82 -S91 0.0884464082782692 H81 -V86 0.0789781024228504 R83 -S88 0.0743565538048041 H81 -S88 0.072626163606207 R83 -L92 0.0661555232347113 H81 -S87 0.0655771009984307 R83 -I95 0.0568013033300871 H81 -S91 0.0452580324705993 R83 -S91 0.0409549870545387 G80 -S88 0.0380461300923811 G80 -S87 0.035614579082681 F84 -I95 0.0355186303557211 G82 -H94 0.0234973023299048 F84 -L92 0.021979163523693 V86 -Q99 0.00232251123537131 L85 -P90 0.000936994934279234 L92 -G98 0.000428998447270401 G80 -L89 -0.0013489240526452 F84 -H94 -0.00315306067719767 L85 -Q99 -0.0042382101637326 F84 -P90 -0.00477540941779134 G82 -L92 -0.0103889899956251 L85 -I95 -0.0104737174380558 H81 -L89 -0.0124366066164048 Y93 -G98 -0.0156212440813129 F84 -L89 -0.0299162533718684 G82 -Y93 -0.0302689487721772 G80 -V86 -0.0453558104837466 L85 -Y93 -0.0456536188763845 H81 -Y93 -0.0485818379626004 R83 -Y93 -0.0487106860659194 L89 -H94 -0.0529012180077064 G82 -P90 -0.0692413278053194 G82 -I95 -0.0910438807542961 G82 -S87 -0.103502583868497 R83 -L89 -0.108029292959847 V86 -I95 -0.120272439918726 V86 -Y93 -0.121772530796641 V86 -L92 -0.136735853907879 G82 -S88 -0.14817580660929 L92 -Q99 -0.149796645899531 F84 -S91 -0.168679940283419 R83 -H94 -0.178160521096459 F84 -Y93 -0.178417096381142 L85 -H94 -0.203767822721538 L85 -L92 -0.204620122075657 L85 -S91 -0.219107126193867 S87 -L92 -0.220308887263143