[Fri Aug 26 16:50:25 2016] >Input file: TMK6YNC6M1D.pdb >TM segments: 43-79 MAIDEN score = -8.5351 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V72 -N77 0.685316189259615 L44 -A49 0.634048173383592 E60 -P67 0.455228403957169 F65 -L70 0.356471415183606 C58 -A63 0.351065198948602 E60 -T66 0.296590457799851 P67 -T75 0.295134412701977 R50 -E56 0.287324420431079 R50 -H55 0.262577824332011 G68 -N77 0.226505798432876 C58 -T66 0.216032207364226 C58 -G68 0.215374167943017 T66 -T75 0.173095128042037 N57 -L62 0.162928975086635 E56 -A61 0.15275440760315 E60 -F65 0.143341381061791 A49 -N57 0.132231396317257 A54 -A63 0.122918470031549 E60 -G68 0.122794190941856 S43 -A51 0.112519331109648 V74 -G79 0.105511088167131 A53 -A61 0.101527525360297 L70 -T75 0.100290168500835 A63 -V72 0.0977301848484124 A54 -L62 0.0909447585766849 A61 -G68 0.0896505487280139 A69 -G79 0.0895801607953457 E56 -L62 0.0882223913770016 K52 -E60 0.0849520410102409 A63 -L70 0.0840159946992669 A51 -C58 0.0837816811267051 A69 -A78 0.0816880317330679 G68 -T75 0.0799722781517378 F59 -M64 0.0710419227519425 A51 -E56 0.0695989404772637 L44 -A53 0.0616943978718751 A63 -A71 0.0591349340058924 A53 -L62 0.0535194760564552 G48 -E56 0.0516560187060899 A69 -N76 0.0510525653338108 K52 -N57 0.0489017003398855 S45 -R50 0.0259734881223816 H55 -A63 0.0242129815431689 S43 -K52 0.0221959925447401 A61 -A69 0.0208532403619071 G46 -H55 0.0200848088137611 L62 -V72 0.018706008028111 T66 -V74 0.0186135987738898 G46 -A54 0.0172515653348997 A71 -A78 0.0168875798652905 H55 -E60 0.0162277664349248 H55 -M64 0.0136373111479062 S45 -A53 0.0111687005658565 V72 -G79 0.0106216741255949 F47 -H55 0.00444890069994175 N57 -T66 -0.000770305007272931 S45 -A54 -0.00616470330554364 A61 -P67 -0.00773636324453619 P67 -V74 -0.00869894954948691 L44 -A51 -0.00920775252870953 N57 -F65 -0.0102752434421802 M64 -A71 -0.0113258444887236 A49 -C58 -0.0133938393807156 L70 -G79 -0.0314206255183147 A51 -E60 -0.0314434045160503 L70 -N77 -0.0317144669565282 G48 -N57 -0.0322855575909031 M64 -L73 -0.0399768021757332 F47 -K52 -0.0407490891757352 L73 -A78 -0.0412620420556596 S45 -K52 -0.0428358093673056 A49 -H55 -0.0471940227380685 K52 -L62 -0.0485210873429509 L70 -N76 -0.0521479703722036 G48 -H55 -0.053648298871507 A71 -G79 -0.0571523893770181 M64 -V72 -0.0618717892075957 E60 -A69 -0.0625916640428352 S43 -R50 -0.0685995761691014 A71 -N77 -0.07217922827782 F59 -F65 -0.0736534283488615 A69 -N77 -0.0742415108388128 E56 -F65 -0.0819863328562498 C58 -M64 -0.0871589153218633 F65 -L73 -0.0917519739130882 G46 -A53 -0.102546249117672 R50 -C58 -0.103174974565656 A61 -T66 -0.106291812297286 F47 -A54 -0.107200716796302 A51 -F59 -0.107816743274713 F47 -A53 -0.108105291700521 C58 -P67 -0.109351458224819 S43 -A49 -0.110536162017578 A51 -N57 -0.115686674637215 G68 -N76 -0.119476623386515 G46 -K52 -0.120322379044437 A54 -A61 -0.121568853452391 A61 -L70 -0.124386138064451 L62 -A71 -0.126181050498016 F59 -G68 -0.13072738894054 F65 -V74 -0.133511571705351 R50 -N57 -0.13496252192289 R50 -F59 -0.1415678384229 N57 -A63 -0.14322240779501 A54 -E60 -0.143954615744726 H55 -A61 -0.144182174162729 F47 -E56 -0.144627020505373 G68 -V74 -0.147657464726946 S43 -G48 -0.149602835345212 K52 -A61 -0.149825755026645 E56 -M64 -0.154205783926782 M64 -A69 -0.155430044076725 T66 -L73 -0.158482744367122 L70 -A78 -0.161638948706306 V72 -A78 -0.164764419560945 A71 -N76 -0.165333090353475 L62 -A69 -0.167577868270288 A69 -T75 -0.168872806234023 G48 -A54 -0.169947422186197 F59 -P67 -0.170161043174991 L62 -L70 -0.179411072581715 A63 -G68 -0.17958430264154 A63 -A69 -0.180551190860027 T66 -V72 -0.182101494552383 K52 -C58 -0.186148215461877 L44 -R50 -0.187535473492391 P67 -V72 -0.193811955966926 L44 -K52 -0.207734559539726 S45 -A51 -0.220853114729104 A53 -F59 -0.22302846722928 H55 -L62 -0.224529205274281 K52 -F59 -0.231868319913016 L73 -G79 -0.232521661588004 F59 -T66 -0.241589050034113 N57 -M64 -0.256910067833267 A49 -E56 -0.261483041686414 E56 -A63 -0.269144559711965 T66 -A71 -0.270306706103689 A53 -E60 -0.274104058627871 L62 -P67 -0.279748659333625 F65 -A71 -0.28182206953771 A53 -C58 -0.304945823008528 G68 -L73 -0.315841115379634 L62 -G68 -0.341716393096144 F65 -V72 -0.374828164503085 C58 -F65 -0.392053563035901 A54 -F59 -0.415754198728985 A49 -A54 -0.416267726179508 A69 -V74 -0.453592322760192 G48 -A53 -0.474594724507566 G46 -A51 -0.475375213317471 M64 -L70 -0.477490456545785 P67 -L73 -0.542553047197515