[Mon Aug 29 17:01:48 2016] >Input file: TMK7CFG0M1G.pdb >TM segments: 54-83 MAIDEN score = -4.9496 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V63 -Y68 0.559607459754019 Y64 -I69 0.517776314108322 C58 -E67 0.444987554390681 A66 -A72 0.307051832715039 A73 -L79 0.299210428555447 A74 -K82 0.25925771538414 R78 -Y83 0.256619612348496 Y68 -A74 0.221708795560154 Y64 -A72 0.221329700190219 H55 -V63 0.194750131007786 W77 -Y83 0.19049136708155 A66 -A73 0.170098622457843 I69 -N76 0.155736208401904 A72 -R78 0.150479494809508 V63 -I69 0.149609343540858 F56 -C65 0.135050389089143 N76 -Y83 0.133507762499784 E71 -R78 0.130154655503611 I69 -L79 0.129247398029489 A66 -A74 0.117618305184276 A73 -S81 0.104510049688451 L59 -Y68 0.0989523104586576 M75 -Y83 0.0924058075245298 A66 -E71 0.0904903462226341 A74 -Y83 0.0901242092547325 V63 -N70 0.0892612519974877 G54 -L62 0.0850144194481861 C65 -A73 0.0792658743270187 Y64 -A73 0.079258596163045 C65 -A74 0.078598581338297 A74 -S81 0.0777831102741553 E71 -L79 0.0710704311042329 G54 -V63 0.071053284774653 L59 -Y64 0.0693590129273804 M75 -F80 0.0690482102825207 G54 -V60 0.0587002178925804 C58 -Y64 0.0552357825639547 H55 -V60 0.0510825721106203 N70 -L79 0.0477038627129689 N76 -K82 0.0469306862797314 A73 -K82 0.046576272390972 N70 -F80 0.0419544471719417 L59 -I69 0.0411935915472643 A73 -Y83 0.0384185810992461 E71 -N76 0.037106385914832 G54 -L59 0.0212569993977478 N70 -N76 0.0208998070208747 V63 -E71 0.0175399550375348 F56 -V63 0.0162825357291183 Y68 -N76 0.00279378695971699 C65 -A72 0.000569584752223129 I69 -W77 -0.00378204561409157 V60 -Y68 -0.00701609025417582 C58 -A66 -0.0158972744296233 E67 -M75 -0.0166166318833367 Y64 -N70 -0.0222723938483327 H55 -Y64 -0.0260806293040639 C58 -Y68 -0.0262453723725371 E71 -F80 -0.0329214598668575 L59 -E67 -0.0370243691190995 A74 -F80 -0.0383495827908251 V63 -A72 -0.0404316352182392 Y64 -E71 -0.0406050885629314 E67 -A73 -0.0456347990887411 E71 -W77 -0.0480282820405495 E67 -A74 -0.0603838430830805 L59 -A66 -0.0623285264162838 L62 -N70 -0.0674734796699383 L57 -Y64 -0.0738267398380525 I61 -N70 -0.074624011264729 C65 -N70 -0.0934661359142215 Y68 -M75 -0.0980575280784208 A72 -F80 -0.108701727004747 G54 -Y64 -0.111131511915082 A72 -K82 -0.111828741772876 A73 -F80 -0.112804460927169 L57 -C65 -0.113624631445055 C58 -C65 -0.119838512492272 L57 -E67 -0.124573613536138 L62 -E67 -0.128055598173122 A72 -W77 -0.134485555301687 N70 -M75 -0.136638535949347 E67 -A72 -0.147027961869941 A73 -R78 -0.149564686531873 L62 -Y68 -0.155445277687524 L62 -E71 -0.156836760488347 V60 -I69 -0.157060105282412 M75 -K82 -0.163392485844566 A72 -L79 -0.164461594596094 L57 -A66 -0.164646511486496 F56 -Y64 -0.166639733056593 I61 -E67 -0.178879395883882 I61 -Y68 -0.183215030241882 M75 -S81 -0.185498063250661 W77 -K82 -0.19336687205116 F56 -I61 -0.193484617621115 F56 -L62 -0.205521758277287 H55 -L62 -0.214785715677553 G54 -I61 -0.242625218079318 Y68 -A73 -0.246571279949292 N70 -W77 -0.251774275224995 V60 -C65 -0.263301690756434 N76 -S81 -0.276093966540917 A74 -L79 -0.276656557246761 C58 -V63 -0.304719002382345 I69 -A74 -0.324247744031092 I61 -I69 -0.324902482760715 V60 -E67 -0.340372571268936 V60 -A66 -0.344745442472433 L62 -I69 -0.347813741909207 L57 -V63 -0.400450736023186 C65 -E71 -0.402082769347221 I69 -M75 -0.407312912562192 L57 -L62 -0.417282560334226 H55 -I61 -0.418325500207799 I61 -A66 -0.438218538275481 L59 -C65 -0.544243553265695