[Mon Aug 29 17:03:43 2016] >Input file: TMK7EKL2M1G.pdb >TM segments: 71-95_ 99-122 MAIDEN score = -10.4282 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L92 -P99 1.34685140309247 L81 -I106 0.968227947591194 Y85 -I106 0.819195072127751 F86 -P99 0.569642967715163 I80 -R110 0.542699330864279 F76 -L81 0.518271653080681 F86 -L92 0.482636487729083 F86 -L91 0.461701896122306 L91 -P99 0.454772538599163 L81 -R110 0.433978327606674 L90 -P99 0.422206717336638 L77 -R110 0.421081700843458 L77 -L111 0.420771534494228 L92 -Q100 0.41288366959728 G74 -C114 0.370311884682663 A75 -G82 0.327568205283993 N83 -R110 0.319274073263539 L95 -Q100 0.319242108262817 G74 -G82 0.309677305581373 W93 -Q100 0.30224160659473 Y85 -P99 0.301456861378893 A75 -G107 0.297647192270538 G82 -L90 0.274538994870648 P99 -P108 0.272666553212364 Q89 -P101 0.26747352680701 W105 -G112 0.260951840474519 Q100 -P108 0.260789736885306 G74 -S115 0.254770205736623 Q89 -R94 0.244502136586818 C114 -V122 0.239232331135443 N83 -L91 0.239110148350457 W87 -G102 0.237114295516275 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