[Mon Aug 29 17:17:14 2016] >Input file: TML7LUI9M4G.pdb >TM segments: 307-313_ 322-329_ 332-340_ 345-354 MAIDEN score = 17.3149 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P309 -E326 10 W308 -I328 2.25993352341963 P307 -L353 1.79038280435522 W308 -F351 1.01395150238001 L310 -L324 0.992362297147148 L310 -R325 0.96346983667593 W308 -V329 0.957962506375649 W308 -A352 0.944744572353465 L310 -V350 0.790384176167573 W308 -L353 0.762064822935872 P309 -L324 0.742516844171395 P311 -L348 0.72698318168537 W308 -V350 0.678642012796111 V312 -L348 0.675549903235769 H313 -R323 0.651624463495561 P309 -A352 0.634813920883056 P309 -L353 0.627805285174771 P307 -I328 0.60105934166368 L310 -R323 0.555034503279928 P309 -F351 0.543277543517533 P311 -G322 0.540580867238996 V312 -L324 0.537978290534094 L310 -L348 0.498726744583546 P309 -E336 0.486559644253522 P311 -E336 0.468599021254139 R327 -L353 0.450756877228473 R325 -V337 0.449599876967447 V312 -R325 0.440065546698933 L310 -F351 0.431438525866006 L310 -R327 0.424982329155642 P309 -I328 0.421380922491064 H313 -V346 0.376243383584434 R327 -D332 0.351954118121973 H313 -L348 0.34136898664165 I328 -F335 0.327514907886453 H313 -G339 0.303559663358844 R325 -E336 0.284849618789161 P311 -S338 0.257005734887366 P309 -L334 0.233532075276103 P311 -L353 0.229979302981278 P307 -L324 0.228765877542331 P307 -P333 0.225874544591855 S338 -S347 0.219569514587086 P309 -S338 0.2107097684477 P311 -G339 0.203102523007469 P307 -V329 0.196339688931745 D332 -V337 0.191507042672929 R327 -V350 0.188787450591053 L324 -G339 0.178051919274226 S338 -L348 0.175809831531343 R327 -P333 0.175744260835636 V312 -E326 0.174823075996539 P311 -R327 0.174348293515839 V312 -V346 0.168978538630943 L324 -V350 0.157042917837266 H313 -E336 0.152501446284058 E326 -E336 0.149801976158554 W308 -L348 0.148008116814514 W308 -N354 0.147579659518936 R325 -A352 0.146935530691131 V312 -E336 0.14632587940891 L334 -S349 0.143490167210323 R323 -V350 0.141227911668103 V329 -V350 0.138290159478215 E326 -L353 0.136322789432895 L310 -L340 0.134854122698274 L310 -P333 0.133425295029406 H313 -E326 0.120772574046152 V337 -S345 0.114021278787008 V337 -S349 0.112284992747139 R323 -S338 0.10784175683807 L324 -S349 0.104454903311861 L324 -L353 0.104280654945731 H313 -S338 0.0997583935403124 L324 -L334 0.0974828063138249 V337 -S347 0.0952039529545452 P311 -F351 0.0946184051030015 L310 -E336 0.0914823595727901 P311 -V350 0.0893697240469824 E326 -D332 0.0890694410159911 V312 -S349 0.0883883772918019 V312 -G339 0.0863281240348197 R327 -L334 0.0861220843265941 G322 -L340 0.085750457346335 P311 -A352 0.0802352501904471 F335 -L340 0.0745255531912268 L334 -L348 0.0742459241404503 V312 -F351 0.0741437773712708 I328 -N354 0.0710618505910907 P311 -I328 0.0678423191655348 L324 -S347 0.0670661051345631 L310 -I328 0.0662344980733591 R323 -S347 0.0658814982915563 E326 -V337 0.0652872997933729 L310 -D332 0.0635948408211799 P311 -L324 0.0620654050413456 G322 -G339 0.061645857138894 G322 -S338 0.0615310123188952 R325 -S349 0.061482107916784 H313 -V337 0.0607065626199215 L340 -V346 0.0591732126461011 R323 -F351 0.0590330325583617 R323 -S349 0.0579902655385229 W308 -E326 0.0578640201589755 S338 -S345 0.0578191201274065 G322 -S345 0.0556248212028437 E326 -S338 0.0524581696614517 L324 -S338 0.0510165018715416 L324 -A352 0.0505506631310402 W308 -V337 0.0501900630901559 R325 -S338 0.0486086777024932 S338 -V346 0.0461917916369852 W308 -E336 0.0460410892697705 E326 -L334 0.0448497307956064 L324 -V346 0.0432568700792544 P307 -R325 0.0402320064075576 P309 -D332 0.0388105840113862 L340 -S347 0.0385945201967182 L310 -S338 0.0336549198311655 L334 -A352 0.0326212376580842 P333 -V350 0.030272451870347 D332 -A352 0.0294325362331884 E336 -V350 0.0276725319392333 V312 -A352 0.0268249175713686 P311 -L334 0.0239151499080279 W308 -P333 0.0224935326068016 G322 -V337 0.0220716005648125 R327 -F335 0.0216616751817152 W308 -R325 0.0178205554664423 G322 -V350 0.015560423485049 R325 -P333 0.0134895735940095 R323 -G339 0.0117274326431428 R327 -N354 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