[Mon Aug 29 17:22:21 2016] >Input file: TML8I1Z7M1G.pdb >TM segments: 115-170 MAIDEN score = 33.6934 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V119 -I135 10 V122 -Q127 10 S129 -A134 10 D115 -L139 2.92727134930124 Q159 -V164 2.23734793512791 I117 -A137 2.08636447569077 S129 -I135 1.26722886155645 I117 -I135 1.08552745475944 I132 -Y160 0.849433281232462 V120 -I135 0.770797227941031 D115 -A137 0.770593185853923 K118 -A137 0.684795993978431 V119 -S129 0.682717003187349 N143 -V149 0.633925470797058 V158 -V164 0.625815098135193 E157 -V165 0.606620142863444 V120 -Q127 0.540049407585075 V158 -V165 0.442174293894516 E157 -T170 0.440842943967731 A134 -V158 0.390472108403193 L154 -T170 0.363680042809548 S155 -S167 0.362046017354598 K118 -Q127 0.357199607932308 S153 -T169 0.352949968607557 K121 -A137 0.332238055855562 T123 -R128 0.327578767134481 K121 -E126 0.324470285537927 L130 -V165 0.317986040358353 A137 -S156 0.313745378411317 A134 -S167 0.304106148486369 L130 -I135 0.299297522176516 R128 -L133 0.2940021269095 V158 -G166 0.281381930090069 T123 -T136 0.277045607650191 V120 -D125 0.267786395339123 E157 -S167 0.267739681574497 K121 -Q127 0.260475126288698 V119 -L133 0.256342574420164 Q127 -A134 0.247588050229541 T152 -T170 0.245891309113892 T136 -T169 0.243801310099519 G116 -L139 0.218850186315526 S156 -G166 0.212888408634406 V122 -S129 0.209723464055626 L130 -T136 0.208971869444567 Q159 -G166 0.200275183192415 L154 -Y168 0.193557098911458 R128 -V165 0.192286942675651 T123 -A134 0.187573402160034 Q127 -Y168 0.187281052729004 Q127 -Q159 0.186490019093982 S129 -T136 0.186124541087644 K121 -L133 0.181057065578482 S129 -A137 0.178028028612825 A137 -T170 0.176222355771151 L133 -S156 0.175623164923579 V122 -L130 0.173690157717405 I135 -T170 0.172478311803901 I141 -V151 0.172312860567782 V120 -T136 0.172291647090572 S129 -Q159 0.17104628381025 T138 -T170 0.167957695254513 V120 -S129 0.157281368936311 E157 -V164 0.15386869079521 S129 -Y160 0.151952164614456 D115 -N143 0.148763005092371 K121 -I135 0.139677757697518 R128 -V158 0.138745905204195 L130 -S167 0.131539151826177 R142 -A150 0.129460477818951 L130 -V164 0.128877041825066 I135 -Q159 0.122755056172505 R128 -S156 0.11833506792431 A150 -S155 0.11645186727581 G116 -A134 0.115922081355271 K118 -A134 0.115873561612913 I132 -E157 0.113737215804786 K140 -V151 0.111947222549607 T136 -S155 0.110050595291966 N145 -A150 0.107361703103891 A137 -V151 0.106798475407552 E126 -T136 0.104894281013102 L139 -L154 0.104254807306611 S129 -Y168 0.103869686703875 I132 -Q159 0.103567944345433 V119 -A134 0.10134280034284 N143 -S148 0.0988474150040193 E126 -E157 0.0978580811155062 E126 -V165 0.0948948080976821 R128 -T136 0.0934460542446172 K118 -R128 0.091250027138341 I135 -V165 0.0899313783881489 K121 -V131 0.0882155368253357 L139 -V151 0.0867973833475104 V158 -S167 0.0863240365516852 A137 -S155 0.0829376488861215 R128 -S167 0.0824912416931083 E126 -Y168 0.079392519734854 T123 -I135 0.0766974196186512 I132 -N162 0.0764802936094736 Q127 -V158 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0.0436835814865204 S155 -T170 0.0433004677031246 K121 -T138 0.0408209042240477 M161 -G166 0.0399872814132491 K118 -T123 0.0390100839182017 A134 -T163 0.0344646711894827 T163 -Y168 0.0341156671101435 G116 -S129 0.0339788266009151 D115 -I141 0.0334126481627051 V120 -I132 0.0316910920029323 T136 -S156 0.0304311468931688 A137 -S153 0.029120432146386 V122 -A137 0.0284311755277713 L139 -V149 0.0273280668650013 Y160 -S167 0.0272700761472123 V119 -L130 0.0270678007974219 R128 -T169 0.0262423294584355 S156 -T163 0.0247833914960602 V119 -E126 0.0243579162465027 Q159 -Y168 0.0240078746541696 E126 -V131 0.0221393982520817 Q127 -T169 0.0213898878460104 V131 -Q159 0.0201368947237111 A134 -Y168 0.0200087512775045 M161 -S167 0.0193299239769882 R142 -Y147 0.0177779420533177 A137 -T169 0.0169728935114835 T152 -Y168 0.0169056188106635 S155 -T169 0.0152980445289561 S129 -T138 0.0136040548206848 I132 -V164 0.0132867821239282 S153 -S167 0.0121864083227377 V158 -T169 0.0111436907527498 V119 -V158 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