[Fri Aug 26 17:20:47 2016] >Input file: TML8NTZ9M1D.pdb >TM segments: 505-518_ 521-530_ 534-546 MAIDEN score = -11.4554 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A526 -E535 0.646616699927041 E525 -L530 0.314481239827752 R507 -I538 0.298202943737762 I538 -K543 0.261071347137875 A526 -R536 0.259462171638906 R507 -A541 0.24785730208422 Q506 -T527 0.228650144114475 F523 -E535 0.225511375307021 P518 -S544 0.213365056940893 R507 -M542 0.182704478485016 D517 -M542 0.16527461414602 E525 -Q539 0.147616488663252 L508 -S534 0.139860648582777 Q506 -A511 0.139096455246202 R512 -P518 0.136598783176628 R505 -A513 0.134329026673971 Q506 -Q539 0.133141159947746 A511 -A537 0.132562811850408 R507 -A526 0.130351575734421 Q506 -E535 0.130157931161579 A511 -S544 0.124891682016846 R536 -K543 0.123895978381165 I510 -L540 0.119923148397151 S528 -Q539 0.118697885100389 S529 -Q539 0.11867989068619 I538 -L546 0.117252874151729 I510 -E535 0.11593588876354 F523 -Q539 0.115728190710572 A513 -A526 0.111817033090538 G509 -A526 0.103832183800726 L521 -A541 0.101684230938842 R505 -R512 0.101013901249705 I510 -Q539 0.0986932716890849 R507 -Q539 0.0986917336734776 A511 -I545 0.0953536841843139 I510 -V522 0.0934036304579493 I510 -A541 0.0924888655406129 A537 -S544 0.0898831273089193 V516 -L546 0.0888775466645568 V516 -V522 0.0887732188750281 I510 -D517 0.0863221975046529 I515 -I545 0.0820444355302676 P518 -M542 0.0773894420902956 V522 -L546 0.0751539959225482 R505 -S534 0.0748658092961943 D517 -I545 0.0739962895942137 Q506 -L530 0.07397730695476 R507 -L540 0.0726423902979867 V522 -I538 0.0723911615566113 A511 -A541 0.0712279117417989 I510 -A526 0.0704567090172139 R505 -L530 0.0703271586717535 I510 -S534 0.0691118312742578 R507 -L530 0.0684803340525071 V522 -Q539 0.0679790154473302 I515 -A541 0.0674716201758891 A511 -L546 0.0661307037867518 A526 -L540 0.0660070948728479 A526 -M542 0.0656827799941455 R505 -I510 0.0638799187238028 I510 -S529 0.0629208357778461 E525 -I538 0.0609887336403192 L508 -A537 0.0597025933799806 E525 -S534 0.0576797304234846 S528 -I538 0.0546921792319073 E535 -K543 0.0540333252435063 G509 -S534 0.0536966778184877 I510 -T527 0.0530379227836749 R507 -R512 0.0526059647599824 A526 -A541 0.0523320267311242 D517 -L546 0.0512166157651341 S528 -S534 0.0482094993718118 Q506 -A537 0.0469189356617512 G509 -A541 0.0468574439067249 F523 -I545 0.041980693867973 P518 -A541 0.0417112806909943 G509 -L530 0.0416420435691709 E525 -R536 0.0414259298639488 A511 -P518 0.0390238667263096 G509 -S529 0.0386403666660868 Q506 -R536 0.0369567195248059 Q506 -A526 0.0363405465695004 G509 -L521 0.0328952150910924 E535 -M542 0.030533672670761 T527 -A541 0.0300600848894912 I510 -M542 0.0293037652588 L521 -Q539 0.0292827052392584 L521 -S544 0.0287878948575575 T527 -M542 0.0286485781400228 R512 -I538 0.0222693340404489 R507 -I545 0.0220162884394719 A513 -M542 0.0204094859495885 R507 -I515 0.0190492978530048 L521 -K543 0.0185769915693879 A513 -A541 0.0158814100475135 Q506 -F523 0.0150710344957057 D517 -S544 0.0141636456989872 A526 -A537 0.0136556579175267 V522 -A541 0.0106967629366403 A511 -F523 0.00987946217267766 F523 -K543 0.00985845467589552 Q506 -S528 0.00700691129965958 R505 -A526 0.00695340453057458 A511 -I538 0.00475139643457789 I510 -A537 0.00232447789311648 S529 -S534 0.000931495103548841 I510 -V516 -0.000648419683411561 Q539 -L546 -0.00156703994881813 V522 -T527 -0.00550287298049845 R505 -S529 -0.00697758849821462 R507 -E535 -0.00714622925399666 L514 -A541 -0.00726940399486775 I510 -P518 -0.00790275433985155 V522 -K543 -0.00817186788444424 A511 -M542 -0.00862957052917057 A513 -I538 -0.00901233881421826 S528 -E535 -0.00941487314692036 G509 -I538 -0.00967143865570042 S534 -A541 -0.00991226729502515 E535 -S544 -0.0100201489858476 L530 -L540 -0.0133378441544867 S534 -K543 -0.0139608846783656 A513 -L521 -0.0144438943824512 A513 -I545 -0.0146078283058856 L508 -V516 -0.015642377273986 G509 -F523 -0.0170174482789074 V522 -S528 -0.0203623389238188 T527 -E535 -0.0223803029871426 V522 -S544 -0.0236732152120251 P518 -I545 -0.0236834619479485 S529 -E535 -0.023806226121547 R536 -A541 -0.0243367115249793 Q506 -E525 -0.0250425307204021 Q506 -A541 -0.0277992857034945 G509 -V516 -0.027992703181472 D524 -S529 -0.0283443764265531 E535 -L540 -0.0283984901932834 G509 -A537 -0.0288749349378206 A511 -S534 -0.0309182903674312 A541 -L546 -0.0333674721103594 D524 -L530 -0.0338085804311519 D524 -M542 -0.0380825472702577 L530 -M542 -0.0383688167691867 R505 -I538 -0.0387584768062963 R512 -L521 -0.0399974396835727 L514 -V522 -0.0436681185574574 Q506 -A513 -0.0439622275080929 L514 -I538 -0.0445898069878048 S528 -R536 -0.0451444231823446 V522 -I545 -0.0463434141404324 L530 -I538 -0.050124787274231 A511 -V522 -0.0511945188181233 I510 -D524 -0.0519390244144228 L530 -Q539 -0.0560170420205957 A513 -D524 -0.0577771018092377 Q506 -L540 -0.0594210456984121 L514 -S544 -0.0596162999264408 I510 -I538 -0.0601357620289544 D524 -I538 -0.060975808172846 R507 -S529 -0.0650949851507242 I515 -L521 -0.0655413920078378 I510 -I545 -0.0668524936872412 Q506 -S529 -0.0669568095830335 S529 -I538 -0.0672801694102487 S534 -M542 -0.0678841931478606 Q506 -S534 -0.069152367401529 R507 -R536 -0.0695997361294256 D524 -E535 -0.0700356785419483 A511 -V516 -0.0706404394834488 G509 -D524 -0.0708820253203055 G509 -P518 -0.070947236226431 Q506 -I538 -0.071422006444346 Q506 -D524 -0.0729876137806169 T527 -L540 -0.0731231281131626 S529 -R536 -0.0737202242485376 R536 -S544 -0.07544201589086 F523 -S534 -0.0757821586907911 D517 -F523 -0.0767148434550036 G509 -E535 -0.0768256831962035 R505 -A537 -0.0775413611170208 L508 -L530 -0.0797449827594683 Q539 -I545 -0.0822975209083445 F523 -A537 -0.0834231772221425 A537 -I545 -0.0835852470731702 Q506 -M542 -0.0835940185248401 I510 -L546 -0.0871119533283444 L530 -A541 -0.0876201510459484 T527 -A537 -0.0879845762265234 L508 -I538 -0.0890228250509848 I510 -S544 -0.0899767476387454 A537 -K543 -0.0911192257306741 D524 -Q539 -0.0925555068907468 F523 -R536 -0.0926483307907451 L521 -A526 -0.0935910678990455 D517 -V522 -0.0967651184585012 L514 -M542 -0.0993944701066989 Q506 -L514 -0.100277651966322 R505 -E535 -0.100646935033978 G509 -V522 -0.104320161881386 R507 -S534 -0.106115668438825 A511 -L521 -0.106861453411797 R536 -I545 -0.107662158639533 F523 -A541 -0.108974432638106 R512 -F523 -0.110427184550149 S534 -Q539 -0.113197511372771 I515 -L546 -0.113664734064908 R505 -L514 -0.120078122703611 F523 -S529 -0.120142705746183 E525 -M542 -0.121167712306467 F523 -L540 -0.124884608005155 S529 -A537 -0.126773350230931 I510 -R536 -0.127365182995512 V516 -I545 -0.127979686625075 A513 -F523 -0.13014870637674 L521 -I538 -0.131166783392292 I515 -V522 -0.131643920728212 G509 -D517 -0.135720982031239 L540 -L546 -0.136919814108838 I510 -L530 -0.137901717364612 Q506 -I515 -0.139045211649859 R507 -F523 -0.140211140728703 T527 -R536 -0.140275541180053 V516 -L521 -0.142384183893091 A526 -I538 -0.143284578646186 Q539 -S544 -0.14456192637184 L530 -R536 -0.145273470042138 L514 -F523 -0.145379010708467 E535 -A541 -0.146715048685344 P518 -F523 -0.151256277491977 Q506 -R512 -0.151538559988245 L508 -A541 -0.158072578718876 A513 -V522 -0.158728589538176 I510 -E525 -0.158945550119868 L514 -L546 -0.160949880867594 A526 -K543 -0.163455485149963 F523 -L530 -0.163624600994089 L530 -E535 -0.163706102511531 A513 -L546 -0.163707684416678 L514 -D524 -0.163915619333606 L521 -L540 -0.164866932919391 D517 -A541 -0.172075825440645 L514 -I545 -0.174525174784614 F523 -S528 -0.18098585941553 L508 -D517 -0.181874784572347 I510 -I515 -0.184794562575448 E525 -E535 -0.185664414866699 A526 -Q539 -0.188915516919415 L521 -I545 -0.191763885417433 F523 -I538 -0.193372102358581 R507 -A513 -0.199340251909595 R507 -A537 -0.201149370594946 A526 -S534 -0.204146038088635 L521 -M542 -0.206426916608526 S534 -L540 -0.207142164424974 R505 -A511 -0.207965526611996 A511 -D517 -0.214724393240529 T527 -Q539 -0.214785429256897 I510 -F523 -0.218376442944852 T527 -I538 -0.232863201866736 R536 -M542 -0.235486805714961 I510 -L521 -0.237085326914874 V522 -M542 -0.240040430279482 R512 -V522 -0.241284348404034 R512 -D517 -0.24540226417614 A537 -M542 -0.251247800966766 R507 -L514 -0.256048216474479 G509 -I515 -0.259587144898328 L508 -A513 -0.268662921174147 L530 -A537 -0.274864090998701 T527 -S534 -0.274906673666666 L508 -L514 -0.278753575962034 I538 -I545 -0.302110443967849 L514 -L521 -0.302117585123229 L508 -I515 -0.311627530551249 A513 -P518 -0.328612618341706 F523 -M542 -0.342257083301169 I538 -S544 -0.351299164935677 L521 -L546 -0.36919470409623 G509 -L514 -0.3874252410088 L540 -I545 -0.39118292457428 P518 -L546 -0.514341269432043