[Mon Aug 29 17:27:34 2016] >Input file: TML8P220M4G.pdb >TM segments: 398-405_ 451-462_ 509-526 MAIDEN score = -8.4450 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P456 -Q515 0.641999651591905 R455 -F520 0.496402385994727 F451 -T526 0.488486340594786 P453 -L523 0.482084005611514 P456 -E514 0.433782708353159 R455 -L523 0.421805345724675 L512 -R517 0.311679283021051 P456 -T526 0.276563334797708 P456 -L512 0.218506134770448 P456 -G461 0.181775516804412 P453 -L518 0.176797290216186 F451 -F520 0.15877420949393 P456 -Q516 0.154192349281764 Q454 -R517 0.139108012920265 Q454 -A521 0.134413461453596 L510 -Q516 0.132221247710398 I458 -T526 0.125324833130678 S462 -A519 0.124891682016846 Q516 -A521 0.123343398729512 L460 -L518 0.121039236719969 R455 -G513 0.119115023336603 P456 -L510 0.118695672976541 R455 -T526 0.112756728823765 Q454 -Q515 0.104150310281238 R455 -R517 0.101782940462277 P456 -L524 0.100021318396786 S511 -A521 0.0988023402325939 L460 -L523 0.0984019399512581 Q454 -R522 0.0974870485433903 F451 -A519 0.0971479660911001 L452 -A519 0.0971166746849451 L460 -L510 0.0969384185794251 R455 -Q516 0.096654022552936 L460 -I509 0.0938017842234385 I458 -L524 0.0938017842234385 Q516 -L524 0.0916545463435181 I459 -L518 0.0893540164687758 I459 -L510 0.0881821675545885 R455 -L512 0.0861152787824663 R455 -L460 0.0846166226876208 F451 -L523 0.0815494806876687 L452 -T526 0.0790057433365057 E514 -R522 0.0788062790289135 F451 -A521 0.0747016333865131 L510 -A519 0.0703487855264129 P453 -A521 0.0700610336476766 I509 -Q516 0.0683484877835247 I459 -Q515 0.0681369449925806 Q454 -L523 0.0664609303195328 Y457 -Q515 0.0632666644801905 E514 -A519 0.0627252393981243 S462 -I509 0.0534180201468464 R517 -R522 0.0528291172408702 I459 -A519 0.0486729454759678 Q454 -L524 0.0480983290473258 P453 -R517 0.0454916917770802 I458 -I525 0.0435100739726764 S462 -Q515 0.0410857229862471 I458 -Q515 0.0347018137385934 Y457 -R522 0.0340967664589407 L460 -R522 0.0329390335814432 Q454 -L518 0.031012875123972 Q515 -L523 0.0272561018692006 F451 -P456 0.0272424745266937 S511 -A519 0.0259273623873497 Y457 -T526 0.0252786241615515 F451 -I525 0.0175739195791803 F451 -R522 0.0172927941104568 G513 -A521 0.0126687594843826 L510 -A521 0.0108472646776159 L452 -R522 0.00578730308985254 R455 -R522 0.00540198618131241 R455 -L524 0.00530652157725697 P453 -I459 0.00208905539277549 P456 -F520 0.00116012752344563 L452 -Y457 -0.00132266716370655 R517 -I525 -0.00256139856309723 P453 -Q516 -0.00296579299687227 P453 -T526 -0.00370019845129343 Q515 -L524 -0.00847817087121872 P456 -G513 -0.0100767622565109 I458 -Q516 -0.0113840281778557 I459 -R522 -0.0125797818108893 I458 -A521 -0.0160295235443187 L452 -A521 -0.0212127915114193 L510 -F520 -0.0220991581653198 V400 -V405 -0.023191566407851 Y457 -L518 -0.0233628191729469 I459 -F520 -0.0245534369452063 L512 -F520 -0.030190729574465 R455 -I525 -0.0318327132525882 P456 -A519 -0.0332144785426318 I399 -S404 -0.0346440878539633 Q454 -F520 -0.0407019107169595 Q515 -R522 -0.0416119046341885 Q454 -A519 -0.0461557056872199 Y457 -F520 -0.0476102983160835 I459 -L523 -0.0500865227913518 R517 -T526 -0.0508535973321989 I509 -Q515 -0.059501122610004 P453 -I458 -0.0600444272514324 V398 -S404 -0.0613559676367803 Q454 -L460 -0.0626082179356736 P456 -S462 -0.0655005315728001 Q454 -I525 -0.0658799750367178 Y457 -S462 -0.0665010628496467 L460 -Q515 -0.0679917627015881 Y457 -R517 -0.0682104462605277 Y457 -L523 -0.0751688068830174 G513 -F520 -0.079278194077947 S511 -F520 -0.0799010836612592 L518 -T526 -0.0823745146304544 I458 -L523 -0.083827424891052 S511 -R517 -0.0905432606268223 A519 -T526 -0.091336551698487 P453 -I525 -0.09214753210758 I458 -L518 -0.092526311554027 I458 -F520 -0.092757601933239 P453 -A519 -0.0947931249687678 P456 -A521 -0.0948822658165982 L510 -R522 -0.0957610376454889 L452 -I458 -0.0999865730688172 I509 -E514 -0.100268405584336 S511 -Q516 -0.102082815950655 V398 -L403 -0.103424936401032 I459 -Q516 -0.10494734134175 R455 -E514 -0.105515389099535 L452 -L524 -0.106261146385731 L460 -A519 -0.107791853818678 A519 -L524 -0.10799838557786 P453 -Q515 -0.112105528689404 Y457 -A521 -0.113486839976252 I399 -V405 -0.115657435710267 F451 -I458 -0.116573099408376 P456 -S511 -0.116645792619352 F451 -Y457 -0.118225377284561 S462 -L510 -0.118468760853857 R455 -Q515 -0.123293922385961 P453 -R522 -0.123421934529611 L510 -L518 -0.124653435086383 I509 -R517 -0.126498517328319 P456 -L518 -0.127187653173814 Q516 -I525 -0.13064076514442 P456 -I525 -0.13197926865392 L512 -A519 -0.132711690324867 I509 -L518 -0.140074551230128 R517 -L524 -0.140435406901241 Q515 -A521 -0.142933269038837 L452 -I525 -0.145795352854515 I509 -A519 -0.146419599171535 G513 -A519 -0.148550268727472 Q516 -R522 -0.151314663898031 I458 -A519 -0.151564311937369 L452 -F520 -0.154931978994317 P453 -L460 -0.156352693511604 E514 -L523 -0.159060999322736 G513 -R522 -0.162599261205213 Y457 -Q516 -0.164012982292681 L512 -A521 -0.164750768218573 L510 -Q515 -0.171698408463659 Q454 -T526 -0.174043129866262 F451 -L524 -0.176628871495441 R455 -A521 -0.178123071161022 R455 -L518 -0.181767749900888 I458 -R517 -0.183407836587875 P453 -F520 -0.184509249949376 Q454 -Q516 -0.194035808653754 Y457 -L512 -0.196271608106279 Q516 -L523 -0.197658992387629 E514 -A521 -0.204107388771566 F520 -T526 -0.227990973373165 F520 -I525 -0.241394661921276 Y457 -A519 -0.24632343841889 L518 -I525 -0.251667384572229 R517 -L523 -0.26204335231572 S511 -L518 -0.264966424104394 Q454 -I459 -0.274055849504367 L510 -R517 -0.275004554922976 I458 -R522 -0.307864956985222 A521 -T526 -0.326160679828289 A519 -I525 -0.342751201845638 E514 -F520 -0.345162936629072 L518 -L524 -0.35848161907794 R455 -A519 -0.364835313980942 L452 -L523 -0.383446580742366 G513 -L518 -0.393643577762984 L518 -L523 -0.405919274688042 P456 -R517 -0.41162117527463 P453 -L524 -0.424191036863884 Q515 -F520 -0.430702823820832 L512 -L518 -0.456032472102396 P456 -R522 -0.469702220963 P456 -L523 -0.469754860380378