[Fri Aug 26 17:26:46 2016] >Input file: TML8P220M9D.pdb >TM segments: 55-72 MAIDEN score = -6.7946 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G60 -I65 0.19187359243672 S58 -L66 0.161455410420391 L66 -T72 0.153445690253257 I65 -T72 0.126624814468025 V55 -A63 0.109567591553101 I56 -A63 0.0965386250571072 I57 -L66 0.0849497331901717 S62 -L70 0.0740430243191903 G60 -L67 0.062703381506191 L64 -A71 0.0447320333569787 M61 -L70 0.0434656047232971 G60 -S68 0.0399025057157056 M61 -I69 0.0340267792051634 A63 -T72 0.0257789429854411 S62 -S68 0.00880300389166599 A63 -L70 0.00857757892438293 I65 -A71 -0.0145550236485716 W59 -S68 -0.0258067260182315 W59 -L66 -0.0292372284513043 A63 -A71 -0.0343226918165938 M61 -L66 -0.0596253826626096 I57 -I65 -0.0597012150064913 I56 -I65 -0.0937568063731415 L64 -T72 -0.0938998522310222 G60 -I69 -0.0943119611266732 M61 -S68 -0.0943317189776982 L67 -T72 -0.0971780331137193 V55 -L64 -0.099489888620897 S58 -L67 -0.114762245126636 I56 -L64 -0.114824127128231 G60 -L66 -0.122237237120161 I57 -L64 -0.133163072666902 S62 -I69 -0.158650425425549 W59 -L67 -0.162065570475898 S58 -I65 -0.164210560857187 L64 -L70 -0.189661393803847 I57 -S62 -0.200991437007896 W59 -L64 -0.227000346791477 V55 -G60 -0.246131194604116 L66 -A71 -0.256821483501819 I57 -A63 -0.298376930101535 V55 -S62 -0.311044217368295 S62 -L67 -0.329626869588424 A63 -I69 -0.339742136872995 S58 -L64 -0.34333733105815 I56 -S62 -0.352869510134293 W59 -I65 -0.357028133415752 V55 -M61 -0.358102385022851 L64 -I69 -0.37052746277188 I65 -L70 -0.388484623050522 S58 -A63 -0.393698080768798 I56 -M61 -0.419829836356073 M61 -L67 -0.441882871667636 A63 -S68 -0.469767093125535