[Fri Aug 26 17:30:11 2016] >Input file: TML8Y892M5D.pdb >TM segments: 9-46 MAIDEN score = -1.6969 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E22 -P28 0.461353702752448 R11 -V16 0.422428957284139 K23 -H31 0.394719681014233 A14 -A21 0.347685287300296 R20 -L25 0.280436419045575 A41 -L46 0.257488454401267 H29 -G37 0.256548240557195 H31 -P38 0.248769701839929 R24 -A32 0.244096538475594 K23 -C33 0.235455311860347 E10 -R15 0.235347339817872 F26 -H31 0.230915328410142 H31 -R36 0.22717114734568 S30 -P38 0.22591553441391 S30 -S39 0.219697696124575 S9 -V16 0.196182784046384 H31 -S39 0.191132582199117 R24 -H31 0.190846740041547 P27 -C34 0.189452628785387 P28 -C33 0.18240913142311 P38 -L45 0.1812186325329 E22 -P27 0.180485078703611 G37 -A43 0.179645207033695 R36 -A42 0.17226102886071 C33 -S40 0.142743693776177 P38 -T44 0.133289411739043 R36 -A43 0.130279030919685 R35 -A42 0.12784706619269 R24 -S30 0.12452528293287 R11 -Q18 0.116562042632998 L25 -S30 0.112683833550989 P28 -G37 0.109737903220968 R17 -K23 0.108734831652218 P28 -R36 0.106726774550914 K23 -H29 0.104445142172901 R15 -R24 0.101119113738224 Q18 -K23 0.0987094600529561 C33 -P38 0.0946572559268004 R11 -R17 0.0926872301730078 R15 -K23 0.0867033492493157 C34 -A41 0.0865276512127795 G37 -L46 0.0813895295247526 R17 -L25 0.0811020711258583 A32 -S40 0.0807716764456361 L25 -A32 0.0736913418363843 V16 -R24 0.0722533072719245 T12 -R20 0.069611255627642 V16 -E22 0.0691912573360476 R36 -T44 0.0683412815782265 A21 -P28 0.0668909606032617 R17 -R24 0.0652515972233323 A13 -A21 0.0530294887309073 R20 -P28 0.0522289733643571 S30 -G37 0.0503775385170897 R24 -C34 0.0497445095771902 P27 -R35 0.04901683796471 R20 -P27 0.0465441703441605 G37 -L45 0.0432425444826698 E10 -V16 0.0403419315122653 R15 -R20 0.0399204433314093 A32 -S39 0.0372839759871795 R19 -R24 0.0324984738305085 R19 -F26 0.03051694947344 G37 -T44 0.0269078478293963 R24 -C33 0.0213303411754004 S9 -Q18 0.0211748245807399 R35 -A43 0.0187305474370696 F26 -R35 0.0172199893536278 R15 -E22 0.0136988056437701 R11 -R20 0.0127378642679887 E22 -H31 0.0102308629306167 R20 -R35 0.0047648781078844 P27 -C33 0.00421339188846792 S30 -R35 0.00216295909330633 A32 -A41 -0.000270197737398448 F26 -C34 -0.00267391421749119 E22 -S30 -0.00329125897829963 T12 -A21 -0.00725679071632923 Q18 -L25 -0.00727886202854916 K23 -S30 -0.0074113685321977 L25 -C34 -0.00838595100650086 R17 -E22 -0.00895843573288291 A14 -R19 -0.0098673955455606 S39 -L45 -0.0133611201898951 R24 -R35 -0.0207257389567674 C34 -A42 -0.0209326758480326 E10 -Q18 -0.0220949773102783 C33 -A41 -0.0273561299398899 A14 -E22 -0.0317576246057882 H29 -R35 -0.0328157448820185 E22 -A32 -0.0345249077471488 S30 -R36 -0.0378324417779741 A21 -H31 -0.0399443225140361 A21 -P27 -0.0415645206490769 R36 -A41 -0.0446451844700426 A13 -Q18 -0.0453355029154929 P28 -C34 -0.0518382522581782 F26 -C33 -0.053820740229388 T12 -Q18 -0.0559811277919564 S40 -L46 -0.0593998698104219 R19 -H31 -0.0621663919508291 S9 -R17 -0.0635576303838805 S39 -L46 -0.0640193394264488 R19 -P27 -0.0711559728573148 R17 -F26 -0.0729197501839777 H31 -S40 -0.07599628560311 A13 -E22 -0.0776090153310123 A21 -F26 -0.0780369951292883 F26 -A32 -0.0830805934201484 S9 -R15 -0.0898357515879541 R11 -R19 -0.0903995371418965 P27 -R36 -0.0905554303877438 R20 -H31 -0.100428127934317 V16 -L25 -0.105082139935848 P38 -L46 -0.10607455946691 R35 -S40 -0.107272865620261 K23 -R35 -0.110673275440202 R19 -P28 -0.113821961894954 Q18 -R24 -0.129207734201526 A32 -P38 -0.130600921757548 R20 -A32 -0.135311265390161 A14 -K23 -0.138798287788451 T12 -R19 -0.138802928989603 P38 -A43 -0.143552210777022 Q18 -F26 -0.153424712695903 A13 -K23 -0.157968696288121 V16 -K23 -0.161817889831712 E10 -R17 -0.16346331868248 R19 -L25 -0.168686799145654 R15 -A21 -0.170905354244828 C34 -S39 -0.174169218688107 A14 -R20 -0.188258657619688 A13 -R19 -0.192792088451743 R24 -H29 -0.193643258388586 S9 -A14 -0.195516940556986 H29 -C34 -0.198173100320283 T12 -R17 -0.204763218193627 K23 -C34 -0.21620764510298 P28 -R35 -0.2214479688585 H31 -G37 -0.224840390093685 R35 -A41 -0.228516480652272 L25 -H31 -0.231720355260557 S39 -T44 -0.233939088109629 R20 -F26 -0.236129023259689 A13 -R20 -0.237306743405759 H29 -R36 -0.243443005895534 G37 -A42 -0.266899562488872 C34 -S40 -0.270116084524954 H29 -P38 -0.2758064527064 S40 -L45 -0.342913532553915 V16 -A21 -0.344531766981456 K23 -A32 -0.354490546292106 K23 -P28 -0.373622221257937 C33 -S39 -0.375376031091514 P27 -A32 -0.431725148587335 A32 -G37 -0.432097155701308