[Fri Aug 26 17:33:50 2016] >Input file: TML9LC64M1D.pdb >TM segments: 778-790 MAIDEN score = -2.3923 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A782 -K787 0.311571758734102 K781 -Y786 0.260654766100605 L778 -S785 0.0853814253894152 E784 -A789 0.0797031857686141 K781 -A789 0.0738473304207536 D780 -A788 0.0218816588796491 K781 -K787 -0.00409169871477211 L779 -A788 -0.0112848613386616 A782 -V790 -0.0172905583967125 L779 -K787 -0.0222185418648913 L778 -Y786 -0.0393699638589879 S785 -V790 -0.0436134892841226 D780 -S785 -0.0577798884426567 L779 -Y786 -0.0612812963634239 L779 -E784 -0.0743766709661049 D780 -Y786 -0.0778452525345941 E784 -V790 -0.0963487191848458 A782 -A789 -0.10740045128137 L778 -F783 -0.155046378818073 D780 -A789 -0.172227766109487 D780 -K787 -0.176941417884408 K781 -V790 -0.189834085215481 L778 -K787 -0.196224075232394 L778 -E784 -0.200192122569557 F783 -A789 -0.204591886514361 K781 -A788 -0.230770638808251 A782 -A788 -0.239906986437639 F783 -A788 -0.248615442274259 L779 -S785 -0.289233085408838 F783 -V790 -0.308876351375468