[Fri Aug 26 17:40:16 2016] >Input file: TMM4MH51M1D.pdb >TM segments: 256-275_ 291-313 MAIDEN score = -14.3582 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P302 -N308 0.349382839099704 C267 -K311 0.349235539612228 C267 -N308 0.280371956922992 L295 -P302 0.238389296465196 T297 -P302 0.21687402446308 C267 -I305 0.211908359098836 C267 -L275 0.183263319199576 P256 -L264 0.179131405471255 A258 -I265 0.157923764932501 L264 -G272 0.152062590525443 I301 -I306 0.144839176390565 I298 -I306 0.131488548690587 V262 -I269 0.131430601367411 L264 -P312 0.129900736707697 V263 -K311 0.12605578014698 I259 -C267 0.125650939555535 C267 -P273 0.108686922893616 G257 -V263 0.106200583291171 A260 -N308 0.102159754218862 G257 -V262 0.0931089348273382 A294 -I301 0.0919901391275242 L264 -N308 0.0919324471637266 L266 -A274 0.0891352585083081 V263 -P312 0.0889213435241789 A274 -I301 0.0860109354433076 D307 -P312 0.0814804367225008 L304 -M310 0.08140080102203 M292 -T297 0.0803100549949777 L295 -L303 0.0798143374489797 L304 -V309 0.0748612851574268 F261 -K311 0.0728596806886301 I265 -A274 0.0727476781077367 Q270 -L275 0.0726190235239985 P256 -F261 0.0682332783048301 Q270 -I305 0.0681253649972156 A274 -I306 0.0661987586680919 F261 -P312 0.0655414182352791 V263 -V309 0.0648172671081184 A293 -L299 0.0539481235017385 C267 -A274 0.0510833402960076 G257 -I265 0.0507859010493701 L303 -M310 0.0463064901049233 F261 -I269 0.0368387021331844 A293 -L300 0.0345460979390784 I271 -I301 0.0311415433335567 C267 -I306 0.0298735213272705 I265 -G272 0.0240567573709108 I269 -A274 0.0220393439401594 A294 -P302 0.0212171788782891 A260 -V309 0.0197508749263546 M292 -I298 0.0173015753100834 L266 -L275 0.0128152784232825 G257 -K311 0.00557302613037036 V262 -Q270 0.00223384483759359 L299 -D307 -0.000815642698218433 A274 -I305 -0.00103187510351255 T297 -I305 -0.00131670419325403 I298 -I305 -0.00451476489663172 I259 -P312 -0.00644642778333449 V263 -I271 -0.0079108493813651 A293 -I301 -0.0149655236936418 G257 -P312 -0.0153093585635393 G291 -F296 -0.0173582807592711 A260 -I268 -0.0176259554358014 V263 -N308 -0.0191411788283444 I301 -D307 -0.0239920718496656 P302 -V309 -0.0258123373265358 A258 -C267 -0.0289203197723396 A274 -P302 -0.0291708036153597 I298 -D307 -0.0305097360614518 G257 -L266 -0.032140227669034 A260 -C267 -0.0353775123312348 V263 -G272 -0.0397047203454868 G291 -T297 -0.0410129033370947 I271 -D307 -0.0462343669645746 D307 -I313 -0.0484362752977368 G291 -I298 -0.0487937820664008 L275 -I305 -0.0537042575746178 I305 -M310 -0.0538836409156562 A258 -L266 -0.0547699900903642 G272 -I306 -0.0608354539059803 L300 -D307 -0.0680201053640825 P256 -V262 -0.0696659860995981 F261 -I268 -0.0734025865850239 L300 -N308 -0.0754924197415505 A260 -I269 -0.0759170467396082 I271 -I305 -0.0789479434091973 L275 -P302 -0.079533738973395 L264 -V309 -0.0804793706011599 I268 -P273 -0.0853406371474961 F296 -P302 -0.0872593582872923 P302 -D307 -0.0881742033875792 L299 -I306 -0.0918822111506271 L275 -I301 -0.0944192182743975 L303 -V309 -0.0967492601521833 L264 -K311 -0.0969412800073446 I306 -K311 -0.100099746585224 P256 -I313 -0.103355435046828 A260 -K311 -0.103659622387442 I271 -L304 -0.103700850811086 I271 -P302 -0.105611574278644 V262 -I271 -0.110814929677711 L266 -P273 -0.112747949451044 I271 -N308 -0.113661052864336 G272 -I305 -0.115538014782542 I306 -P312 -0.116050021700773 I259 -K311 -0.118432156038959 I301 -N308 -0.120290728961807 F261 -Q270 -0.120992670315838 P273 -I305 -0.123007331609967 F296 -L304 -0.123714693662623 C267 -V309 -0.124471693575243 I305 -K311 -0.125941963659651 I265 -P273 -0.125948678604801 P256 -I265 -0.126610233539363 P256 -K311 -0.127249801967918 I298 -L303 -0.128573920815363 P256 -P312 -0.130750058479099 A260 -I313 -0.132258261396805 Q270 -I306 -0.136476902268257 I268 -I305 -0.136644944457858 I268 -N308 -0.13920426028875 F296 -I305 -0.139372826454938 L303 -N308 -0.144129666438722 I259 -L264 -0.144804571224824 A274 -L304 -0.147918689224388 L295 -L304 -0.148890999916386 A294 -L303 -0.151366112175823 I271 -I306 -0.154844393438681 F296 -L303 -0.155212616202361 L275 -I306 -0.155238068538368 L304 -K311 -0.155730403292161 L266 -G272 -0.158303985610117 T297 -L304 -0.160443038943079 I259 -I268 -0.160490000700053 A294 -L300 -0.165685018105806 G257 -C267 -0.167277904687291 I268 -I306 -0.167446337265499 A260 -P312 -0.17069383588971 G257 -L264 -0.177226759914701 L300 -I306 -0.189127184613324 V262 -I268 -0.197921272660952 P256 -V263 -0.203088481275953 A294 -L299 -0.204185563399738 L300 -I305 -0.208097323712016 I265 -Q270 -0.221363872363885 V262 -C267 -0.22442377362972 L264 -I271 -0.224715187959946 I259 -L266 -0.230851607967447 C267 -G272 -0.244868879155227 I259 -I265 -0.255826064276981 N308 -I313 -0.257855384865424 V263 -Q270 -0.264260786490625 V263 -I268 -0.266266586261199 T297 -L303 -0.266532396160226 I265 -I271 -0.292085326820076 F296 -I301 -0.303428309556629 V263 -I269 -0.309365690686644 A260 -L266 -0.311312196689752 A258 -L264 -0.318830281023807 C267 -D307 -0.320074384507023 A258 -V263 -0.320911172653172 L266 -I271 -0.323852418512683 I269 -L275 -0.331101175965162 I268 -A274 -0.331274165584592 I268 -L275 -0.341545639261634 A293 -I298 -0.351362368944776 L264 -I269 -0.369711623696491 F261 -L266 -0.38230213322348 L299 -I305 -0.383750689823842 L295 -I301 -0.393835005310605 L295 -L300 -0.39767291151994 L299 -L304 -0.414776263096999 I298 -L304 -0.417520824927133 A260 -I265 -0.436777059449993 L264 -Q270 -0.461366167472171 F261 -C267 -0.807696351920285