[Mon Aug 29 17:40:18 2016] >Input file: TMM4MJL3M2G.pdb >TM segments: 240-283 MAIDEN score = 5.2729 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E263 -T278 4.84353360306363 V267 -A274 1.85830425240772 V242 -P265 1.30717696293276 V266 -F273 0.933434876952442 L243 -E251 0.92809764205766 F264 -L276 0.873784904009673 L243 -V266 0.870442477954024 F264 -L277 0.7644158621347 L256 -F264 0.761941727473713 A252 -F264 0.67245665147348 V242 -F264 0.649643085350393 G241 -F264 0.643128736430227 P265 -L277 0.642524571572451 V267 -F273 0.638451847917817 V266 -L276 0.627174688725655 V242 -L255 0.53425619130217 L243 -P265 0.525140121318451 F240 -T259 0.516530400326771 P265 -F273 0.514454151139623 L243 -V267 0.498235093334205 L277 -I282 0.47855391304526 L256 -R279 0.478238810239873 E251 -P265 0.455701478421237 F264 -T278 0.442306310186404 L255 -F264 0.440178846911877 V242 -V266 0.435206344301642 P265 -A274 0.432960920119152 V267 -Q272 0.429601692655663 L243 -A252 0.425801219774958 E254 -P265 0.421707085443992 V267 -G275 0.420691318032169 Q244 -D268 0.416213466439943 E263 -L276 0.409530369024449 L243 -F264 0.396820292142348 A247 -A252 0.393057205642943 L243 -R248 0.378209854995428 Q244 -P265 0.367256483097922 V266 -L277 0.366293007700942 G241 -Q261 0.360166812846819 L243 -D268 0.350551120966974 L256 -N262 0.347478709710588 A252 -L277 0.316093013129127 G241 -G271 0.300907854985999 L243 -L255 0.299558728268023 A253 -G281 0.294687839917283 E254 -Q261 0.294664550077258 F240 -F264 0.279104368728269 V242 -E263 0.259925189008657 L255 -N262 0.242259627492478 R248 -E254 0.240595844326409 A252 -G281 0.240367910701682 V242 -V267 0.240059730146136 P265 -T278 0.238614831267801 L243 -T259 0.236494331906795 L255 -T278 0.224441273059299 Q244 -G269 0.222934883290121 L257 -T278 0.205751317042426 E251 -T259 0.20145830389636 E254 -T278 0.200571575504134 S245 -A274 0.197639012503593 S260 -P265 0.196020110939767 S245 -V266 0.189981150034123 Q244 -S250 0.181294376815921 G241 -A258 0.179249830969415 S245 -V267 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