[Fri Aug 26 17:42:01 2016] >Input file: TMM4MN58M1D.pdb >TM segments: 36-89 MAIDEN score = 3.4312 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W80 -C85 1.86858159644492 L70 -I77 1.23475462014989 L56 -D66 1.2343621342162 V57 -D66 0.957727015207794 I52 -H75 0.946131762954506 H72 -I77 0.928950802501405 L68 -H75 0.822939047923016 L79 -L84 0.717931963118543 F40 -L45 0.7040193282088 V57 -Y65 0.640826235953528 L70 -S78 0.57248151287677 H72 -L79 0.552037964009982 A69 -R76 0.537668655141226 Y59 -A64 0.517887953798065 I52 -L79 0.478832750461325 A51 -H75 0.469896410868523 L73 -S78 0.458805236774624 R67 -H75 0.437584973287122 A60 -Y65 0.42663537141003 S54 -R76 0.423116297076013 R67 -L73 0.421816416964372 A51 -T83 0.415080118938482 V57 -A64 0.394633277504462 I82 -F87 0.38314933874387 L79 -C85 0.380368667030538 A69 -H75 0.366901431337486 A51 -L84 0.365225766940439 R67 -I77 0.363070806468414 A51 -L79 0.362995043851884 A69 -I77 0.356250578650183 A58 -A63 0.351952035152669 L56 -A64 0.350617235891486 H75 -W80 0.336486013575503 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