[Fri Aug 26 17:46:00 2016] >Input file: TMM4MNX1S1D.pdb >TM segments: 504-540 MAIDEN score = -7.2783 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E510 -L515 0.631739411290036 E517 -V522 0.576038820454044 V531 -V536 0.420094370068414 E509 -A514 0.34433570976501 N523 -K530 0.322264982876546 L508 -A513 0.312134046057728 Q504 -E510 0.271331397289912 Q521 -A526 0.26886812123963 Q504 -T511 0.24485191548091 L518 -N523 0.242665402798854 A526 -K534 0.2407269127521 S525 -S535 0.21609366222499 A526 -A533 0.203965812560131 V522 -E527 0.20374511480958 A532 -S540 0.179505511073065 E527 -A532 0.16491340845403 E509 -E517 0.149832974213817 N528 -E537 0.149219489677302 A513 -Q521 0.136966599081704 V522 -K530 0.128210469533177 E509 -L515 0.118794786325113 A524 -A532 0.113421663174322 A506 -A514 0.110147229966277 L518 -S525 0.105404615370055 Q521 -N528 0.102688913688836 A512 -E517 0.097037870260098 A513 -V522 0.0880651901414113 D516 -N523 0.0854465249785039 K530 -V538 0.0852936787957317 T511 -S520 0.0821517211578335 A514 -V522 0.0812832393572038 A524 -V531 0.0801151409157086 T511 -D516 0.0787495607981477 A512 -S520 0.0786360651577187 L515 -N523 0.0772768611127392 N528 -K534 0.073783780874622 A532 -E537 0.0718160036181841 L508 -L518 0.0716279053506241 S520 -A529 0.0675554188619145 A514 -Q521 0.0525861901383451 A505 -A513 0.0505751123566132 Q521 -A529 0.0424140946846112 A513 -S520 0.0328508115482293 D516 -S525 0.0297670570711743 S525 -A533 0.0273475695895335 S507 -L515 0.0271854055104004 V531 -S540 0.0267177577478681 N528 -V536 0.0240633756865198 S520 -E527 0.020755901806278 A505 -A512 0.0201214501578697 A514 -N523 0.0189574950602838 A524 -A533 0.0177462065925988 S520 -N528 0.0154595637998064 V531 -E537 0.0130963949523935 E527 -A533 0.0125617357954155 T519 -S525 0.0102522830336689 S507 -D516 0.00933049013805404 Q504 -A513 0.00840142371497837 L508 -D516 0.00064249539717709 D516 -A524 0.00031372886143366 A533 -V538 -0.00197727389764135 V531 -A539 -0.00266594822892507 A529 -E537 -0.010084857494685 N523 -A532 -0.0137975202221061 T519 -A526 -0.014504730001784 A529 -V538 -0.0238614418402285 Q521 -E527 -0.0244198610825945 Q504 -A512 -0.0253486296066212 S525 -K534 -0.0257948251583775 E527 -S535 -0.0283302884525494 K530 -S535 -0.0339385771633816 A505 -A514 -0.0339839305777572 E517 -A526 -0.0419182622244701 N523 -V531 -0.045207914301467 A526 -S535 -0.0508155679013775 V522 -A529 -0.051278043334591 E527 -K534 -0.0516695691688902 A512 -Q521 -0.0641936041902902 A526 -V531 -0.0669525722068487 E517 -S525 -0.0684590134110841 K530 -S540 -0.0801369617376975 S507 -A514 -0.081588725275628 A532 -V538 -0.0834848954314809 A506 -T511 -0.0848925294897496 E510 -L518 -0.0849141898986843 L508 -A514 -0.0874301396378776 L518 -A526 -0.0951832709672424 E509 -D516 -0.0976823907300523 K534 -A539 -0.0982977560221316 K530 -V536 -0.098412864941833 A529 -K534 -0.102761236004789 N528 -V538 -0.107239826874992 A513 -T519 -0.109965440329599 A505 -T511 -0.113389002983016 T519 -A524 -0.116199892351019 E510 -D516 -0.116580453960135 Q504 -E509 -0.117766684648613 V522 -N528 -0.11922576045172 A514 -T519 -0.119510753129059 E509 -L518 -0.121881637762525 D516 -Q521 -0.122109863882577 E527 -V536 -0.122752336742407 A505 -E510 -0.122855332905045 L515 -A524 -0.131534820090859 A512 -T519 -0.132502743108839 A513 -L518 -0.137580894643603 E517 -A524 -0.141914651363237 T519 -N528 -0.144280369793597 K534 -S540 -0.156740849086981 A506 -L515 -0.162840545612861 K530 -A539 -0.162880635615308 L508 -E517 -0.165419006760682 A529 -S535 -0.169804026822163 S525 -K530 -0.171489191245634 A506 -A512 -0.172720143625968 K530 -E537 -0.173887162611481 T519 -E527 -0.175029641904751 A533 -A539 -0.179280236748273 L518 -A524 -0.191784297427191 A533 -S540 -0.192303868518732 T511 -E517 -0.194525291839507 A532 -A539 -0.196002004080568 A506 -A513 -0.197071770189745 A514 -S520 -0.197250185562574 S525 -A532 -0.197564761962612 A529 -V536 -0.197626795654064 N528 -S535 -0.211474145948097 E510 -E517 -0.211813371246042 A526 -A532 -0.213816668441195 N523 -A529 -0.214280786777635 E510 -T519 -0.216194928636452 S507 -A513 -0.227719917936832 S520 -A526 -0.227752299226125 Q521 -K530 -0.237609837621672 N523 -N528 -0.23822216741951 N528 -A533 -0.239558847109387 L515 -V522 -0.257111277561482 E517 -N523 -0.266072252864829 L515 -S520 -0.270119434450534 T511 -L518 -0.289952619570022 D516 -V522 -0.29522568132888 L515 -Q521 -0.299853860813074 A512 -L518 -0.301425616882155 S525 -V531 -0.30552990922774 A524 -K530 -0.306499855741103 V531 -V538 -0.331506501969144 S520 -S525 -0.336974639102165 A524 -A529 -0.399944716677799 L508 -L515 -0.424249636998303 T511 -T519 -0.437730125598653 S535 -S540 -0.500107371712287 S507 -A512 -0.529977547887217