[Fri Aug 26 17:51:33 2016] >Input file: TMM4MQS5M1D.pdb >TM segments: 116-138 MAIDEN score = -2.9787 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L133 -R138 0.400232238247101 A119 -A126 0.373054879627814 G131 -A137 0.291968976139206 L123 -G129 0.274437308435177 G129 -A137 0.155568886063132 G127 -L133 0.147906695205581 G131 -D136 0.135750572128128 P130 -D136 0.129107452351448 F122 -G129 0.122594336870545 G120 -G127 0.117469899419638 G131 -R138 0.0976622448102198 A121 -F128 0.0957135400238691 I116 -L125 0.0894123100442309 V124 -G131 0.0753148849229022 L125 -G131 0.0738152121142277 I116 -L123 0.0671083590117716 T117 -L125 0.0655497895438788 A121 -G127 0.0609670537034628 A126 -A132 0.0489921677998893 G127 -S134 0.0330074840220402 F122 -G127 0.0265133199785552 T117 -A126 0.023407825737372 I118 -A126 0.0232744254109685 F128 -L135 0.0188778413880279 T117 -V124 0.0153566827938709 L123 -G131 -0.00254164063451723 P130 -R138 -0.00400657315310582 I116 -F122 -0.0102340715767242 G120 -F128 -0.0198386035534592 F122 -P130 -0.0293188321356403 G129 -L135 -0.0313742920748794 P130 -A137 -0.0328000948420537 L123 -P130 -0.0381720779534032 A121 -G129 -0.0405464964469173 G127 -L135 -0.0463052189652853 V124 -P130 -0.0546589557878701 A119 -G127 -0.0605653897009106 F128 -L133 -0.0866780696822311 G120 -L125 -0.0956368181838947 T117 -F122 -0.0977929417201833 I116 -V124 -0.0997022733646351 G129 -S134 -0.0998624139155496 G127 -A132 -0.103115159507691 G129 -D136 -0.110792036241348 G129 -R138 -0.113226175964501 V124 -G129 -0.113290930793371 I118 -L123 -0.131164562722278 L123 -F128 -0.151521582492122 A132 -R138 -0.176962609506166 F122 -F128 -0.199343430156508 F128 -S134 -0.203960137239897 G120 -A126 -0.213131612262266 A121 -A126 -0.215178952229095 A119 -L125 -0.224168960238597 A126 -G131 -0.225002347962343 T117 -L123 -0.228120917260619 I116 -A121 -0.279276748683399 I118 -L125 -0.306756525815614 A132 -A137 -0.347853058598842 A119 -V124 -0.400345394813597 L125 -P130 -0.439740842315638 P130 -L135 -0.44079322730397 I118 -V124 -0.467985985477198