[Mon Aug 29 17:55:57 2016] >Input file: TMM4MST4M1G.pdb >TM segments: 258-296_ 380-394_ 480-487 MAIDEN score = -16.7597 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E290 -L295 0.588321176360399 R274 -I280 0.58095621993271 M287 -L292 0.340621590502463 L388 -A481 0.317303822652891 E272 -L277 0.31093272376066 M287 -L295 0.268257453318045 E285 -V291 0.245326389195339 G282 -E290 0.242900135671149 V286 -V291 0.238786254452302 H271 -N278 0.234235074955059 S390 -A481 0.218747179229354 S284 -S296 0.213253953088067 P276 -S284 0.211483524353002 L386 -N391 0.190936476451401 Q383 -L388 0.18662407616924 L389 -K394 0.168458670525181 V384 -I482 0.163268752315535 S284 -L295 0.15685716967289 A267 -E272 0.155090775199484 L273 -N278 0.153712260692555 A392 -I482 0.149783157970787 A267 -R274 0.149759311185473 R382 -A483 0.146777646581084 V384 -V393 0.145186835010833 S390 -E480 0.142099182775988 K262 -S270 0.13892256925791 R382 -S390 0.130617844323274 A380 -A483 0.127018926993824 S263 -H271 0.125381940424381 V286 -L295 0.124898299711238 V286 -S296 0.124355210392424 L388 -I484 0.123904807730171 A258 -S268 0.119613274482339 A279 -S288 0.117198879095351 G282 -V291 0.113864727196445 A380 -S390 0.111569489989078 M381 -P487 0.10957079299111 M381 -P486 0.108745452831727 V384 -A392 0.107208327939787 N387 -E480 0.107008898990119 T289 -P294 0.10665434700261 E272 -A279 0.105419654228348 R264 -E272 0.10338453304705 T275 -E285 0.0990246919387432 N391 -E480 0.0952944761386116 A261 -H271 0.0929355048672198 H271 -P276 0.0920164771387686 L388 -E480 0.0915008667171429 T289 -S296 0.0884921750253973 V384 -A481 0.0878855473935802 L273 -L281 0.0848175122822838 A279 -M287 0.0829904315085193 S284 -L292 0.0804330953599459 N387 -K394 0.0781584113835856 F283 -L295 0.0749335264233237 I280 -M287 0.0745083080565405 L389 -A483 0.0731623000379877 T385 -K394 0.0706398705187636 V384 -N391 0.0688584189621158 R382 -A392 0.0643808608536354 A380 -I484 0.062990504330255 M381 -S390 0.0605846294983703 H271 -I280 0.0603999589248311 M381 -I482 0.0577976719858668 E285 -G293 0.055247541302772 A380 -L485 0.0549747928533479 L386 -A481 0.0533533561101773 E285 -L295 0.050705822749268 N387 -A483 0.0463737588546183 A392 -A483 0.0440362056579779 L266 -E272 0.0390868649690139 N259 -A267 0.0369037181315474 L386 -A483 0.0333719986707093 T385 -N391 0.0332603928862427 L389 -E480 0.0323896399015062 M381 -L386 0.0315318552842854 M269 -P276 0.030269191551874 L260 -S268 0.0272786249358853 A279 -T289 0.0266479310363752 N278 -V286 0.02215606453178 R382 -I484 0.0216744437937991 T275 -S284 0.0195683309588404 L273 -G282 0.019236619435909 G282 -L292 0.0189060048290797 I482 -P487 0.017180193576654 S270 -N278 0.0163586715205372 V393 -E480 0.0148849236738782 K262 -H271 0.0147092292542572 T275 -F283 0.0136399733779844 R264 -M269 0.0136204570733027 N387 -A481 0.0132507901829104 M287 -G293 0.0128477484143372 S284 -G293 0.0114166984668453 L281 -V291 0.0106374533457796 I280 -T289 0.00907113224332745 N259 -S268 0.0086517826706749 A258 -A267 0.00688594046404134 E290 -S296 0.00623598283086796 A392 -E480 0.00186104348409355 E272 -K394 -0.0014902731246087 F283 -S288 -0.00281984298181603 T289 -L295 -0.00417523108096596 L386 -I482 -0.00557599239623841 T385 -E480 -0.00591632345358217 S263 -E272 -0.0105496790170861 N391 -A483 -0.0108065389827674 K262 -A267 -0.0109870339105198 Q383 -A481 -0.0118080044364608 L277 -E285 -0.0122879522087465 R274 -A279 -0.0142335021966203 A267 -T275 -0.0147775348466843 T385 -S390 -0.0204677900224839 R382 -N391 -0.0235230380618181 R274 -G282 -0.023846952091838 F283 -L292 -0.0251899400079578 A258 -L266 -0.0253604682510016 S268 -T275 -0.0260814428051073 T275 -G282 -0.0263718535197945 Q383 -A392 -0.027259697564856 V393 -A481 -0.0278976894466161 E272 -I280 -0.0293816703192382 L266 -R274 -0.030402540483518 K394 -E480 -0.0325877909278814 M269 -L277 -0.0366461813416743 A261 -M269 -0.0373882410142303 S268 -P276 -0.0376731970868729 L386 -A392 -0.0431565578641342 F283 -V291 -0.0445435898177711 Q383 -N391 -0.0455629299969149 A380 -L389 -0.0455753944456081 Q383 -A483 -0.0469485660978073 P276 -F283 -0.0479107248178557 S284 -E290 -0.0522400261616518 L386 -K394 -0.0525535568878963 T385 -L485 -0.0538395287249438 V286 -P294 -0.0546847074349546 K262 -S268 -0.0553728923459297 T385 -I484 -0.057605415345277 M381 -I484 -0.0580061905011462 A380 -L388 -0.0590930075817533 A261 -S270 -0.0610528632054921 M381 -A481 -0.06113707935538 M269 -N278 -0.063900300608962 N259 -F265 -0.0662668270717103 S268 -R274 -0.0713323953259157 I280 -S288 -0.0716416582821164 Q383 -S390 -0.0744187957206188 N387 -I482 -0.0745750953822913 A380 -L386 -0.0750222756624686 V286 -L292 -0.0770250452666907 S288 -S296 -0.0773971894171841 V286 -G293 -0.0782867184015208 F283 -S296 -0.07990014484615 L273 -I280 -0.0799697224996745 A258 -F265 -0.0806794139257976 T385 -V393 -0.0819428497767993 N391 -A481 -0.083153481033913 M269 -R274 -0.0834030603479565 M381 -L389 -0.0899890920745694 L281 -V286 -0.0901528347670997 E285 -E290 -0.090186167165681 L260 -M269 -0.0913548416719461 A380 -N387 -0.0915876514546377 L281 -S288 -0.0958487427981209 R264 -S270 -0.0960606779515493 T385 -A481 -0.0961552512396286 T385 -A392 -0.0963067049522417 N259 -L266 -0.0974128060412536 N278 -F283 -0.100175926391265 L277 -V286 -0.102467979078684 I280 -E285 -0.107294497710374 R264 -L273 -0.113506644530958 L277 -S284 -0.119587570583977 T385 -I482 -0.120441799378572 S268 -L277 -0.122203612093725 H271 -A279 -0.124089936905354 G282 -S288 -0.124150142724166 N387 -A392 -0.124440165642485 S288 -L295 -0.125620960532403 N391 -I482 -0.129034629096288 L281 -E290 -0.129750380958408 L281 -T289 -0.130436451654059 M287 -P294 -0.132685003216018 S288 -P294 -0.139931586092747 V384 -E480 -0.140919182810515 F265 -L273 -0.144173156901808 F265 -R274 -0.144418767079483 R274 -F283 -0.144626188859992 M269 -T275 -0.14599946286873 A279 -E285 -0.146009816976833 L388 -V393 -0.148660040387814 H271 -L277 -0.150105878608497 M381 -N387 -0.151867102093647 S263 -S270 -0.152251486685715 L277 -F283 -0.154291439788427 L389 -I482 -0.155111411630753 L386 -E480 -0.155995850062672 K394 -A481 -0.156965396669498 K262 -M269 -0.161539300841883 R382 -L485 -0.162593484218175 L389 -A481 -0.167834986449568 L388 -A483 -0.168319514447373 A279 -V286 -0.169600758798475 T385 -A483 -0.170133947274549 I280 -V286 -0.182161417108211 G282 -T289 -0.186952710583864 L266 -L273 -0.187329478684219 A261 -A267 -0.190872290093416 N278 -M287 -0.191583424536885 M287 -S296 -0.191900932821744 S263 -M269 -0.191963732802535 F265 -H271 -0.192478010622821 V384 -A483 -0.194091308314043 A258 -R264 -0.197289532374161 T275 -I280 -0.197817655660773 R382 -L388 -0.198351583142185 L386 -V393 -0.199699779616157 L388 -K394 -0.200460618103747 S288 -G293 -0.201091649589965 A261 -L266 -0.202752889211967 E285 -L292 -0.204539089227929 P276 -G282 -0.206693163274642 A261 -S268 -0.207373162338841 V384 -I484 -0.216299685938819 S270 -L277 -0.21843335899304 R264 -H271 -0.220668815720588 R274 -L281 -0.225156165751573 V384 -L485 -0.226546953665766 M381 -A483 -0.228985239676387 S270 -T275 -0.238835653435063 S270 -P276 -0.239981845433697 A392 -A481 -0.248982804599296 V291 -S296 -0.250599732306143 P276 -L281 -0.262559121683358 F265 -S270 -0.263397484786617 L273 -A279 -0.271405504706665 R382 -L389 -0.275749092309771 L260 -A267 -0.277824237968231 E272 -N278 -0.278423080091167 M381 -L485 -0.278969465777045 G282 -M287 -0.284465773483578 S284 -T289 -0.284540615079724 M381 -L388 -0.291000605173688 N278 -S284 -0.291401901780803 N278 -E285 -0.296885580892341 F283 -E290 -0.303948574001438 T275 -L281 -0.308222983280993 A267 -L273 -0.308873836691814 S284 -V291 -0.324140834695223 V384 -S390 -0.325814798841937 N387 -V393 -0.332153699611374 S268 -L273 -0.348368728583003 F283 -T289 -0.350596425636081 L266 -H271 -0.369262483728849 A380 -T385 -0.375421786635719 P276 -E285 -0.379852299242338 R382 -N387 -0.385327989084002 L260 -F265 -0.385772770925636 V384 -L389 -0.395909296873256 N259 -R264 -0.396464604086767 Q383 -L389 -0.396827183451055 L260 -L266 -0.401863544562424 F265 -E272 -0.406905005660064 L277 -G282 -0.408773659187398 L281 -M287 -0.41340089578056 L388 -I482 -0.416998590802471 A258 -S263 -0.497584329076582 A279 -S284 -0.544864293965251 S263 -S268 -0.554932447349044