[Mon Aug 29 17:59:20 2016] >Input file: TMM4MU66M1G.pdb >TM segments: 177-207 MAIDEN score = 7.1187 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M178 -L195 1.17890947412355 S181 -C193 1.01993465613895 L180 -V194 0.941350894336111 Q184 -V190 0.71213215715094 L180 -C193 0.693955536235444 L180 -L195 0.660101747210341 M178 -L198 0.640366629144673 L179 -V194 0.627023481095106 S181 -G192 0.513250077695955 M182 -A191 0.427753117816556 P177 -L195 0.3742546181323 L179 -A196 0.358855564561809 Q184 -G192 0.346060539849105 S181 -A191 0.337950303363926 M182 -G192 0.333904894271595 M178 -G197 0.326115893009453 T183 -V190 0.317468934621897 S181 -A196 0.296065654653673 L180 -G197 0.259371369423536 L179 -C193 0.247766264739481 A186 -A191 0.246123876470913 G192 -L204 0.242606685479926 M178 -A196 0.241654462882786 L179 -L195 0.239520610151089 P177 -F199 0.224724294418366 C193 -I207 0.215532567433225 A196 -S203 0.214717752439394 Q184 -C193 0.206962386505255 G192 -I207 0.194362527936824 S181 -L204 0.169858111991186 L180 -A196 0.164454669019594 P177 -L198 0.155172516519791 M182 -V194 0.15118447470313 M178 -V194 0.147521225868103 Q184 -A191 0.145540765701067 F185 -G192 0.143558417076023 S181 -V190 0.140742175215369 M178 -L204 0.140688775250728 M182 -V187 0.139153009820732 V194 -L202 0.120567927166171 L198 -S203 0.113608105223874 Q184 -V194 0.105179669670474 S181 -A186 0.104125561445241 C193 -L198 0.0990875077072815 V187 -G192 0.0973416462291936 M178 -P201 0.0944075360485774 L180 -A206 0.0911708753211666 A196 -P201 0.0884252212956991 M182 -C193 0.0857853339472501 S181 -V194 0.0837513044882385 M182 -A196 0.0828416929165001 M182 -C188 0.0803992872215131 L180 -L204 0.077508082517725 M178 -L202 0.0770108895859831 P177 -V194 0.0702647350993626 G197 -S203 0.0687228276625627 L179 -G197 0.0630639435331393 P177 -C193 0.0622302319961987 S181 -A206 0.058996267746684 L180 -L198 0.0582019982349906 A191 -L204 0.0460911544501545 V194 -S203 0.0451754224345331 P201 -A206 0.0435124697912563 A186 -G192 0.0432275879793718 M178 -S203 0.0412051482516445 T183 -C188 0.0397940624711026 L179 -A191 0.0324629665688836 V194 -A206 0.0313929713444998 A191 -I207 0.0299714541339928 L179 -S203 0.0292701258140462 G192 -D205 0.0272430420637573 L195 -D205 0.0272061865521316 L198 -L204 0.0251121465406747 M182 -A206 0.0249823191725947 P177 -L204 0.0241229953404893 S181 -A189 0.0220843136041431 L179 -F199 0.0189101191259904 A189 -I207 0.0182218772529543 S181 -D205 0.0154356104092594 G197 -L204 0.00659379889317968 L180 -S203 -0.00115303454772242 M178 -F199 -0.00530236801666212 C193 -S203 -0.00758442132914317 V190 -A206 -0.00826077111928392 F185 -C193 -0.010246165105702 S181 -L195 -0.0152876873700318 F199 -L204 -0.0248138220640595 T183 -G192 -0.0256756800433724 L195 -P201 -0.0295121371308689 L180 -V190 -0.0329630157073186 M182 -A189 -0.0355310052399276 L195 -E200 -0.0363179596271275 M182 -L204 -0.0389256933649271 V194 -P201 -0.0411720227400174 G192 -S203 -0.0413386564671001 V194 -D205 -0.0419721569512621 M182 -V190 -0.0435865775077344 V190 -I207 -0.044833513939821 T183 -A191 -0.0466410775473254 S181 -G197 -0.0466854270044633 Q184 -A189 -0.0486046791461694 L179 -L204 -0.0502414970899085 L179 -L202 -0.0514440747532037 A191 -D205 -0.0523440235994079 L180 -A191 -0.0608474508642027 C193 -L204 -0.0639946067667625 A196 -L204 -0.0648461929618387 L195 -L204 -0.0651500985967646 L195 -A206 -0.0728501999353428 V194 -I207 -0.0845781645572892 T183 -A189 -0.0878463472519837 T183 -L195 -0.0882372050495044 L179 -D205 -0.0915742784945652 F185 -A191 -0.108559445463743 L179 -A206 -0.11991732390277 L179 -P201 -0.119945318344047 L180 -D205 -0.121887371918492 L179 -E200 -0.128309993906388 G192 -A206 -0.129131303263725 M178 -E200 -0.134583159408412 V194 -E200 -0.135889788747737 M178 -G192 -0.140466844466365 V194 -F199 -0.140875686243561 P177 -E200 -0.143286462384122 P177 -A196 -0.144051088975443 C193 -L202 -0.145253312276192 L180 -L202 -0.151348459478925 G197 -L202 -0.175995786554129 V190 -D205 -0.176767251855258 L179 -G192 -0.177164688472623 A191 -A206 -0.201079284662986 A196 -L202 -0.206939389268912 T183 -V194 -0.208744806135078 M178 -C193 -0.224485487855348 P177 -S203 -0.23957959661011 P177 -L202 -0.243012278221259 C193 -A206 -0.246125821640522 T183 -C193 -0.255377267326632 V194 -L204 -0.272836940830267 L195 -S203 -0.277464151999746 L195 -L202 -0.295814169373703 F185 -V190 -0.297803941492766 C193 -D205 -0.301177779117351 M182 -L195 -0.307747422287839 L179 -L198 -0.318926926167752 L180 -G192 -0.421345625176051 P177 -P201 -0.602030605438809 P177 -G197 -0.618439199278106