[Fri Aug 26 18:07:30 2016] >Input file: TMM4MUU5M1D.pdb >TM segments: 83-117 MAIDEN score = -7.0321 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L84 -E90 0.85563247589128 L84 -L89 0.72834832357765 L84 -Y91 0.627237517424269 E83 -P93 0.440699562063397 A104 -G111 0.328693422296772 A86 -G95 0.328387194743444 E83 -E90 0.305392798796682 E83 -L89 0.293163238094613 E105 -V110 0.28447945182362 L84 -P93 0.241648661921467 A92 -L97 0.211804749041314 E83 -Y91 0.208170363764283 G111 -P117 0.177297594649835 G87 -A92 0.161121354816162 L84 -G95 0.161093359463043 G87 -G95 0.153420366572905 R85 -A96 0.14966559331466 E90 -I98 0.145601918806193 G87 -I94 0.138867220052358 E83 -V88 0.136689166562055 V88 -P93 0.135710697673826 A86 -Y91 0.132097983380338 V108 -S113 0.128895778808208 G112 -P117 0.122202744769542 L89 -L97 0.119513307547488 A103 -G111 0.115913426529882 G87 -P93 0.113540207790278 R85 -I94 0.106641431188676 V109 -A114 0.105827333434631 A104 -G112 0.104736853377974 A86 -I94 0.100622553746817 R85 -Y91 0.0983483545105797 G87 -A96 0.098217554333941 A96 -A104 0.0938572093919294 L89 -I98 0.0912699499740116 V88 -L97 0.0887973100609023 L97 -L106 0.0780458153128354 Y91 -A96 0.0721304114014547 V88 -G95 0.0699432912023799 I107 -S113 0.064880254036555 L84 -A96 0.0600315103793712 L106 -G112 0.0586227449586472 A92 -L102 0.0518269969767573 G111 -S116 0.0387369688756143 L100 -V108 0.032904800003446 R85 -A92 0.0289040219697845 A92 -L100 0.0275790070479762 E83 -G95 0.0228564826295108 V88 -I94 0.0195858215450695 A86 -P93 0.0172257038205812 V110 -F115 0.0134104524347491 G99 -I107 0.0124921375110367 G95 -A104 0.010021069353257 E90 -L97 0.00927467323675391 V108 -A114 0.00436388527357323 L102 -G111 0.000428998447270401 L97 -E105 -0.00363731790093058 P93 -I101 -0.00895809476489262 G95 -A103 -0.00959623206820259 G99 -V108 -0.0167361503430161 E105 -G112 -0.0187754170141772 L89 -I94 -0.0301415539228524 A96 -E105 -0.0343342602533019 L89 -A96 -0.0367715463807263 A92 -I101 -0.0445219317387124 P93 -I98 -0.0454074203355677 E83 -A92 -0.0560028251427609 Y91 -G99 -0.0594627626000543 L100 -E105 -0.0656463585751554 V109 -F115 -0.0667453575545265 A86 -A96 -0.0751053567038013 E90 -G99 -0.0794567821786491 I94 -G99 -0.0843510781928458 L84 -I94 -0.0876555318344897 V88 -G99 -0.0891994481398637 G95 -L102 -0.0954311885641257 I94 -L102 -0.096639134643913 I94 -I101 -0.101864617188608 A103 -V108 -0.104398973166411 L100 -V109 -0.104632687421792 A103 -V110 -0.107199662786573 R85 -G95 -0.108121635188328 R85 -L97 -0.113247955323238 V108 -F115 -0.117309730630273 G99 -L106 -0.117597612908172 L89 -G95 -0.118918665160738 V88 -I98 -0.121108396386015 P93 -L102 -0.124051543689506 I101 -V110 -0.132226632147412 I94 -A103 -0.14224693187118 R85 -I98 -0.144948246212079 I107 -G112 -0.154804200501381 I98 -I107 -0.15622084250879 L102 -V110 -0.158591704868098 E83 -I94 -0.15950182164214 A92 -I98 -0.161373590421436 E105 -G111 -0.161695108190133 L102 -V108 -0.164020570122127 G99 -E105 -0.164117790850292 I98 -L106 -0.164224669836653 L100 -I107 -0.164834075495941 I101 -V108 -0.164982428386862 E90 -A96 -0.17504649953863 A96 -L102 -0.18389066548402 I98 -E105 -0.188126513750581 I101 -V109 -0.190249886026568 A86 -A92 -0.191258457877608 Y91 -L100 -0.197759583200656 A96 -A103 -0.2002953192346 P93 -G99 -0.201561706260006 L97 -A104 -0.218623771925038 A92 -G99 -0.231473941669585 Y91 -I98 -0.232401377138296 Y91 -L97 -0.232882156556601 L106 -G111 -0.255536287530905 I98 -A104 -0.263995352372032 L102 -I107 -0.265254942744129 L102 -V109 -0.265737605205344 G95 -I101 -0.272089900511131 E90 -G95 -0.275424915028288 V88 -A96 -0.280442853882448 L84 -A92 -0.297177731616078 L97 -A103 -0.303885395635575 L100 -L106 -0.323614680857331 A104 -V109 -0.335741663064512 P93 -L100 -0.345803116232982 I101 -I107 -0.347022335808048 A104 -V110 -0.355956844396472 A103 -V109 -0.368854386028696 I94 -L100 -0.383717014879084 I101 -L106 -0.38859880528484 I98 -A103 -0.399693737617037 L97 -L102 -0.40836617594562 G95 -L100 -0.420483259513976 A96 -I101 -0.426291074242444 G99 -A104 -0.479255477200082 R85 -P93 -0.488334405678247 R85 -E90 -0.627327489293275