[Fri Aug 26 18:10:45 2016] >Input file: TMM4MVL0M1D.pdb >TM segments: 36-61 MAIDEN score = 0.8540 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P38 -A43 0.938936545684491 V40 -N45 0.553955959483607 A46 -V51 0.470663806085964 E41 -T54 0.446111221177102 V40 -A46 0.338094407770335 R39 -L44 0.307082634644395 E41 -P48 0.306353854928496 A46 -L52 0.300871112469255 E41 -V51 0.256427130767044 E41 -V47 0.243543520087097 T54 -A59 0.190525620737359 P37 -P58 0.179955529303119 V40 -V56 0.165403994026135 V40 -L52 0.156211859585059 I36 -L44 0.134171297034523 N45 -T54 0.124470170533058 V40 -A59 0.124085895770757 I36 -E41 0.121501126940613 S42 -V51 0.115235293757272 R39 -T54 0.11337629831039 N45 -L55 0.110251206478184 A50 -V56 0.0928993717861557 A43 -A59 0.0903857521196478 L44 -L52 0.0900455785975973 S42 -T53 0.0851986407984259 V40 -A57 0.0837676431715666 N45 -A50 0.0835298274342748 S42 -L52 0.075820224242575 P38 -L55 0.0740328227089843 L44 -L55 0.0740193782163523 P38 -L52 0.0734847012476516 L44 -A59 0.0682732889095283 S42 -V47 0.0673741922567812 A43 -L55 0.0601942887218909 R39 -V51 0.0540009194427701 A46 -A59 0.0525249150870342 V56 -V61 0.0501016267651337 V47 -L55 0.0474669203458236 I36 -S42 0.0466238371496255 V40 -L55 0.0464817504893986 A43 -L52 0.0457414282082911 V47 -T53 0.0446897845061178 L52 -A57 0.0443880986325587 P37 -L44 0.0425223892398865 V51 -V56 0.0327517830923485 A46 -L55 0.0286610169305708 L44 -T54 0.0270367249643138 A43 -T53 0.0241467721299133 A49 -T54 0.023407825737372 V40 -P58 0.0208999422296356 N45 -T53 0.0171611925739565 L44 -P58 0.0155913665002299 A43 -V51 0.0123129022056432 A46 -V56 0.00981292389655142 A43 -P58 0.00768718504489485 P38 -N45 0.00719284778914187 A46 -T53 0.00577957611655044 P38 -A46 0.0027819698815299 L44 -V56 -0.0012320075042398 V47 -T54 -0.00816671113582698 P37 -T54 -0.0117143445813097 A43 -T54 -0.0152957255873369 E41 -L52 -0.0224918865887247 S42 -T54 -0.0236873213503457 P48 -T53 -0.024959931206487 L44 -T53 -0.0258582513534549 L52 -P58 -0.0293717634303947 V40 -A50 -0.0295894237445951 E41 -L55 -0.0397913888194115 R39 -T53 -0.0411983169951595 L55 -F60 -0.0454830713664194 E41 -A49 -0.0458477994798311 V40 -V47 -0.0459046938509209 L52 -A59 -0.045915576946749 N45 -A59 -0.0510866425630672 L44 -A50 -0.0515673543173616 R39 -L52 -0.0517777799325971 V47 -L52 -0.0531181417199456 E41 -A50 -0.0610778749085745 V40 -P48 -0.0748321508303244 R39 -P58 -0.0773014265969278 E41 -T53 -0.0829710550413081 E41 -A59 -0.084378837692753 A50 -L55 -0.0891528320025938 S42 -L55 -0.0953441843043361 L44 -V51 -0.105276151042856 L44 -F60 -0.112443083421373 A46 -T54 -0.117061163971337 R39 -L55 -0.125636295998649 P37 -A43 -0.130152830629884 P37 -N45 -0.153494530840242 N45 -L52 -0.164199216750407 N45 -P58 -0.165940371373166 L44 -A57 -0.166455835319243 V40 -T54 -0.169551629567679 S42 -P48 -0.170828381282477 R39 -A46 -0.178205025559192 P38 -T53 -0.203583127026691 V40 -T53 -0.209626163430808 P38 -T54 -0.218505823514454 N45 -V51 -0.218859434203928 P37 -S42 -0.226106246495901 I36 -A43 -0.229225817043112 R39 -V47 -0.252651640486551 R39 -N45 -0.261733976897204 E41 -A46 -0.267731623864578 T53 -P58 -0.275392132406013 V40 -V51 -0.27739533452736 E41 -P58 -0.37485800126563 P38 -L44 -0.567949928723785