[Fri Aug 26 18:11:45 2016] >Input file: TMM4MW41M1D.pdb >TM segments: 137-198 MAIDEN score = 17.7514 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I141 -D152 10 V165 -A194 1.90789457908185 I141 -I150 1.5992519471892 I142 -L154 1.23478956155478 E145 -I150 1.22598427667036 I142 -I155 0.972546904513111 L140 -D152 0.894970408079199 L154 -M184 0.716883289234599 A146 -D152 0.708764065145367 L154 -M183 0.62170917388405 V165 -G193 0.617549586285335 V165 -A195 0.517197371222659 L140 -F147 0.516614554139815 F147 -D152 0.515445737764308 P156 -L180 0.485340599395213 L154 -P185 0.468653950532715 P156 -P182 0.446186167833069 I155 -M184 0.433714966365752 T164 -A192 0.431023612259692 E145 -P185 0.426080031658332 E145 -G151 0.424873193488103 Y167 -A195 0.424350411079618 L162 -S189 0.418562069899188 T164 -A194 0.406370861565968 V160 -C166 0.377438165914894 A159 -L180 0.37351695430505 I141 -R148 0.369071255881238 L162 -L190 0.355580928460739 A159 -T164 0.34779065655581 P156 -M184 0.347035375191925 C166 -A194 0.336771705556243 C166 -I198 0.320067962708976 C166 -G176 0.314996107687966 G169 -G193 0.313829792593385 A159 -A186 0.305393266526554 I141 -F147 0.304752386445477 A163 -L190 0.304617675345758 Q153 -M184 0.297330235135417 A171 -L196 0.292320206365416 D152 -A186 0.290292532075989 P156 -T164 0.289777480895464 A159 -M184 0.288282733564548 A168 -G176 0.284582083904851 L162 -A192 0.282458565307339 L158 -A163 0.280898769964961 A170 -A195 0.276608456970958 L144 -G149 0.272004709605619 G169 -F177 0.256414090116988 A163 -R178 0.255222466327265 V161 -C187 0.251432370597469 I141 -G151 0.243673128916933 L154 -G188 0.242913298561292 L154 -P182 0.242305569612885 V160 -V165 0.239498819041742 A170 -G176 0.236299028053637 L158 -G179 0.234380722693531 A159 -S189 0.223448607199707 A171 -G176 0.221537040487045 I155 -C187 0.215208371105274 G143 -D152 0.212073248238488 V165 -G176 0.212005506548741 L162 -P185 0.208759327881404 V161 -S189 0.208169762940942 L140 -I150 0.205707483695427 G139 -E145 0.205146953313008 V160 -M183 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