[Fri Aug 26 18:11:58 2016] >Input file: TMM4MW47M1D.pdb >TM segments: 786-810_ 868-878 MAIDEN score = 11.1153 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q787 -D877 10 Q787 -G792 5.4691647521766 L791 -D877 0.830013197619302 F788 -T874 0.812569991099108 S794 -G875 0.629208739230527 Q787 -F878 0.607207265589994 S789 -I873 0.5472255829788 F788 -S794 0.47290230228475 S789 -S799 0.470900178733983 S794 -S799 0.469584941182104 L791 -T798 0.42759382792542 D786 -F878 0.401655138544119 F788 -S793 0.375959002439677 S789 -T798 0.373382518548227 S795 -A800 0.353907679009766 R804 -L809 0.275222901903115 G792 -F878 0.255047363353991 S789 -F878 0.246618413222203 F788 -S795 0.234386182347341 T869 -T874 0.230869724134016 F788 -D877 0.229111050674314 F788 -A800 0.225983304815692 N801 -G875 0.211050274530799 Q806 -P870 0.207992800205314 L791 -T796 0.202977826707765 G810 -I871 0.19977001960028 T796 -E803 0.197917831722096 G792 -D877 0.188997128281068 D786 -T798 0.187858201886672 G797 -G875 0.185112393283847 L791 -T874 0.182977070669347 A800 -G875 0.18294258083351 E803 -T874 0.181634004813904 Q787 -S793 0.168820829828018 G792 -S799 0.166122186070538 L809 -P870 0.16326138381487 T798 -D877 0.161610500312658 T796 -T874 0.157916549909237 G792 -G797 0.157372110493447 D786 -T874 0.156627449194313 F788 -S799 0.151462815915629 D786 -T796 0.145094606056535 D786 -G792 0.1416386306342 D786 -D877 0.140956462220261 F788 -T802 0.133282585373837 S789 -N801 0.125975929877383 T802 -G810 0.123982109499785 N801 -T874 0.123341447988859 Q787 -G797 0.122575319106126 T798 -Q806 0.119916739543689 L791 -A800 0.119542954933893 N801 -Q806 0.113395130263777 D786 -S794 0.10455496529352 S789 -A800 0.100999369544297 G792 -T874 0.0878455181246491 L791 -G875 0.0877716647085123 L791 -N876 0.087092416482605 S790 -A800 0.0852346964871562 E803 -L809 0.0852284531383961 S793 -F878 0.0838509759383133 S789 -I872 0.077253839427772 Q806 -I871 0.0763684000311775 S799 -D877 0.0719013589317965 F788 -N876 0.0708136887291246 Q787 -I873 0.0692943601221352 S793 -T802 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