[Fri Aug 26 16:25:30 2016] >Input file: TMM4MY53M1D.pdb >TM segments: 10-65 MAIDEN score = -13.2291 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A51 -Y56 0.571099846974693 V41 -W46 0.386836565169861 A44 -G53 0.33059848607329 Y37 -L42 0.322735821093492 A49 -A55 0.288101380912066 S26 -G33 0.254121641982657 S11 -Y17 0.252912104142062 H13 -P19 0.24769950652607 M23 -R30 0.246110306849941 P19 -I24 0.23953367496058 T54 -W62 0.236485112935662 L47 -G53 0.234122429690022 W46 -T54 0.231517682714953 T40 -W46 0.191554757754159 W45 -G53 0.183240204426045 Y57 -G65 0.180365755042144 G53 -N61 0.177383584574946 P21 -H29 0.175463506190536 T22 -T32 0.172541395225071 A51 -D58 0.16809098880282 I48 -Y56 0.143218136787377 A51 -V60 0.140272662640173 T32 -Y37 0.138398016409134 S52 -V60 0.135623876376973 I20 -I27 0.135016902967483 Y56 -W62 0.133999891118859 A50 -Y57 0.130635806871586 A49 -T54 0.130551869186988 L42 -G53 0.130149458913023 H13 -M23 0.127818553842413 L42 -Y56 0.127485783294082 H13 -K18 0.120678562763554 V43 -A51 0.120545059752604 S26 -A35 0.114507408717165 H29 -Y37 0.113933448319446 M28 -Y37 0.111335725524957 V41 -L47 0.110427940075997 I27 -L36 0.110305547673525 A35 -V43 0.10979160303285 T40 -G53 0.109527487892426 S52 -N61 0.102032783596703 V43 -A50 0.0941611079243505 T40 -I48 0.0907848238888835 Q15 -I20 0.087916621944915 I31 -L36 0.0871504372225291 F38 -L47 0.0844157835243236 M28 -L36 0.084310360774972 W45 -S52 0.0811975446747952 A44 -S52 0.0811631857888739 P12 -P19 0.0796610077769078 I16 -I24 0.0777976935027391 L42 -A50 0.0773021581754314 L14 -I27 0.0670653795738927 D58 -L63 0.0670138894291243 A49 -Y57 0.0629438635761601 P19 -M28 0.0610247714605134 T22 -R30 0.0609981818185845 A44 -A50 0.060923821591893 V43 -Y57 0.0596782949894203 P19 -I27 0.0588469803726879 G34 -L42 0.0566941176394306 V43 -S52 0.0551993315401003 H13 -I20 0.0520123754010395 I48 -A55 0.0507231171371396 L36 -V43 0.0470919886347421 A55 -F64 0.0464873373018513 S11 -I16 0.0449410515564672 I20 -H29 0.0428755511344545 I20 -M28 0.042746556554302 A55 -L63 0.0395609748954731 V43 -Y56 0.0390365821733475 S26 -G34 0.0372865040714366 G33 -L42 0.0332116220215095 I48 -G53 0.0328252928064181 V43 -V60 0.0325898490001215 W46 -Y56 0.0318828480682685 I31 -T40 0.0315552666576728 Y37 -W46 0.0269501564305705 Y56 -L63 0.0268353288041645 I16 -P21 0.0267534472543876 G33 -T40 0.0261358646234711 G39 -W46 0.025300850914177 M28 -F38 0.0251725484977556 G39 -L47 0.0233736513723006 K18 -I27 0.0227402018643053 Q15 -I24 0.0215278047288314 V43 -A55 0.0164898425993343 M25 -A35 0.0154043148234457 R30 -A35 0.0148326236681298 Y56 -N61 0.0141986783389965 G53 -W62 0.0141504742431935 V43 -T54 0.0051008170122967 R30 -F38 0.00144247170583833 V41 -A49 0.00101767783130136 L14 -P21 -0.000953861834412706 M28 -G34 -0.00258460532607918 M23 -I31 -0.00294229218821052 G53 -D58 -0.00347206601375971 T32 -L42 -0.0038156572193313 I31 -G39 -0.00426228366675208 L47 -T54 -0.00520123249112081 F38 -W46 -0.00565107711762458 L36 -A44 -0.00665311711265382 G39 -A49 -0.00805789418696712 T54 -L63 -0.00823551102447784 L42 -A49 -0.00842580331363374 I20 -M25 -0.0120966103189559 V41 -I48 -0.0150903723654467 T32 -G39 -0.0151602134540134 M25 -G33 -0.0162740773869254 A50 -W59 -0.0165467999134472 D58 -G65 -0.0205766395069374 Y17 -T22 -0.0225853638892638 T22 -I31 -0.0227947300683109 A55 -W62 -0.0243523445838143 S26 -I31 -0.0266618474300753 W46 -Y57 -0.0276232784395365 T32 -V41 -0.0280913195305752 S52 -D58 -0.0284183094605101 W45 -Y56 -0.0319532894416731 T40 -A49 -0.0383140675126057 F38 -I48 -0.0395689753169179 W59 -G65 -0.0409678131892195 P12 -Y17 -0.0410900817154101 G39 -I48 -0.0425499726002254 M23 -T32 -0.0451074953655519 A55 -N61 -0.0470424509856461 W45 -A51 -0.0523748405356623 G34 -T40 -0.0526585617573496 A50 -V60 -0.0526831051892822 W46 -A55 -0.0535177508669502 T22 -H29 -0.0539996664370497 A44 -A51 -0.0543774372152708 I27 -A35 -0.0609464351473052 G34 -V43 -0.0614901988929146 Y17 -M23 -0.065066642498619 H29 -A35 -0.0670717384832118 S11 -K18 -0.0671309789642924 L14 -M23 -0.0698641492228989 K18 -S26 -0.0699660291423716 Y37 -A44 -0.0717224906153764 R30 -L36 -0.073583618270165 G33 -V41 -0.075061316551273 A35 -A44 -0.0752519372121625 R30 -Y37 -0.0757866784481263 P21 -S26 -0.0758770279144831 T54 -W59 -0.0792346917493352 Q15 -M23 -0.0800433664840838 T40 -L47 -0.0830126256939039 Q15 -P21 -0.08302632830988 A51 -Y57 -0.0846703241825233 P21 -R30 -0.0848719259642543 L47 -Y56 -0.0850504156601062 L14 -I24 -0.0882039361124805 K18 -M23 -0.0890902672799825 L14 -I20 -0.0934290633316021 W46 -G53 -0.0958348639416342 Y57 -L63 -0.101685675073852 W46 -A51 -0.10220511446001 S52 -Y57 -0.10256940943331 I24 -G33 -0.102845784184511 W46 -S52 -0.105320348886713 I24 -T32 -0.107320771147315 T54 -N61 -0.107501943229303 Y56 -F64 -0.108881687667238 A44 -Y56 -0.11330432295386 A49 -Y56 -0.113879736115571 G33 -G39 -0.114131970096825 L47 -A55 -0.11423181813598 Y37 -W45 -0.116806885354556 Q15 -I27 -0.116880171176318 G53 -V60 -0.119783445202985 M25 -R30 -0.120116801088297 A49 -W59 -0.123867150899673 Y57 -W62 -0.135428859939127 G34 -V41 -0.135478780377572 P12 -K18 -0.138507979800027 L10 -Q15 -0.13873706569801 H29 -F38 -0.140677225128471 L42 -Y57 -0.140755816976333 I27 -T32 -0.142276760938042 L42 -A51 -0.147625719551799 P21 -M28 -0.148216549149926 P19 -M25 -0.151700864701724 F38 -A49 -0.152419128740903 M28 -G33 -0.153418793454119 Y57 -F64 -0.157494426299666 L10 -Y17 -0.158213467742614 V43 -G53 -0.15855206171201 L10 -I16 -0.158743985040796 K18 -M25 -0.159296007535822 I24 -I31 -0.15977161836526 A50 -A55 -0.166488515607158 R30 -G39 -0.170193836367823 S52 -W59 -0.171671734037358 A50 -D58 -0.172358572397049 Y17 -I24 -0.172524370696273 V60 -G65 -0.177650056813869 H29 -G34 -0.187904964149975 F38 -V43 -0.189078599733188 L42 -S52 -0.191207298452117 G39 -W45 -0.193019978042454 T54 -V60 -0.193223555133352 T22 -I27 -0.196477089237856 A44 -A49 -0.196647900021163 L47 -S52 -0.200542533411729 A35 -T40 -0.201305088678853 I31 -F38 -0.205154808356339 L36 -W45 -0.205478089903316 I31 -Y37 -0.206092974978817 D58 -F64 -0.209071706218963 K18 -I24 -0.212940029803268 S26 -T32 -0.213602935715722 T40 -W45 -0.227288020291683 L42 -L47 -0.228151721884881 L36 -V41 -0.228516487561635 M25 -G34 -0.229117630727821 I16 -M23 -0.229482398643025 A50 -Y56 -0.244421756444857 H29 -L36 -0.245735945609452 F38 -A44 -0.248049337134021 M23 -M28 -0.248480228012614 I27 -G33 -0.254192906370259 I27 -G34 -0.25521106057103 W45 -A50 -0.257224196225748 A51 -W59 -0.259227364045211 G33 -F38 -0.262438223055735 T22 -M28 -0.269031687203719 W59 -F64 -0.269149309267113 L14 -P19 -0.269805543473439 A35 -L42 -0.272670000374421 I24 -H29 -0.276006138962726 M23 -H29 -0.278175648577386 G34 -G39 -0.279207784107033 T32 -F38 -0.27979026845644 P21 -I27 -0.283480937937157 P19 -S26 -0.287246301563628 F38 -W45 -0.288689022137303 G53 -W59 -0.292023205443961 M25 -I31 -0.308287697604593 A55 -V60 -0.30932434304715 I20 -S26 -0.323113369142334 V43 -I48 -0.329619419152507 M25 -T32 -0.329765293659235 V43 -A49 -0.344082345012799 A35 -V41 -0.368433493317942 M28 -A35 -0.372204439587213 L42 -I48 -0.374773331132745 I24 -R30 -0.386416344357821 Y37 -V43 -0.386434007986295 G39 -A44 -0.406980146210753 L36 -L42 -0.427977491787934 T32 -T40 -0.494879496659802