[Fri Aug 26 16:26:24 2016] >Input file: TMM4MYT6M1D.pdb >TM segments: 82-106 MAIDEN score = -2.1568 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q88 -I94 0.863513088050691 A98 -W103 0.849981279697115 Q88 -M95 0.60262969477785 I101 -G106 0.432261771994562 Q88 -V93 0.333362647113832 N96 -S102 0.263306601549107 P97 -W103 0.229178593698886 E87 -V93 0.203550996215115 L91 -P97 0.156200298300575 E87 -N96 0.129709246225377 P97 -S102 0.107416434254655 R89 -I94 0.102304680976405 M95 -S102 0.0989837253505268 M86 -M95 0.0867934208779957 V93 -A98 0.0843060648145144 Q88 -P97 0.0776993500528471 M85 -M95 0.0595936090419807 T82 -R89 0.0409761881375577 T82 -L90 0.0405776684962307 E87 -M95 0.0346430486503166 T82 -E87 0.0276561848178044 A98 -L105 0.0247290936089284 P97 -G106 0.0229888580646889 M85 -I94 0.0221625056145975 L90 -P97 0.015839150798632 N96 -I101 -0.00201827984157443 M99 -L105 -0.00924754696062102 T82 -L91 -0.0135740136716858 K84 -I94 -0.0266074651294734 M86 -I94 -0.030795011674948 R89 -N96 -0.0351497859333129 L90 -M95 -0.037251247035508 E87 -K92 -0.0386283278899122 F83 -V93 -0.0407844373736932 M100 -G106 -0.0491112741188209 Q88 -N96 -0.0507104298172072 M86 -K92 -0.0524342402922329 I94 -M99 -0.053339170513124 R89 -M95 -0.0607203625100103 K84 -V93 -0.0691172917446776 P97 -V104 -0.0773426617025983 M99 -G106 -0.0914535731593054 F83 -R89 -0.0981848920048098 L91 -A98 -0.11613618483711 P97 -L105 -0.122210971789334 K84 -K92 -0.123127437653421 N96 -W103 -0.125419161201447 F83 -L91 -0.131505780284124 T82 -Q88 -0.133200149247449 K84 -L90 -0.133870998203722 K84 -R89 -0.137119837228442 M100 -L105 -0.139725319018536 K84 -M95 -0.145941199071838 M85 -K92 -0.146450948397845 A98 -G106 -0.148260848278686 A98 -V104 -0.148728717821021 K92 -P97 -0.155356627918831 F83 -L90 -0.17821237166774 L90 -N96 -0.191037862064133 E87 -I94 -0.196855131553935 N96 -G106 -0.212357461104744 K84 -L91 -0.229496212079249 L91 -N96 -0.231709351089299 M86 -V93 -0.252934310217339 M85 -V93 -0.273360345400341 M85 -L90 -0.277065502840335 M99 -V104 -0.299455901040183 E87 -P97 -0.367409325926344 F83 -K92 -0.37950931735009 M86 -L91 -0.38134342849721 F83 -Q88 -0.412433309798663 M85 -L91 -0.440500549532381