[Mon Aug 29 16:41:37 2016] >Input file: TMM4MZQ1M1G.pdb >TM segments: 359-391 MAIDEN score = 17.9916 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C366 -A388 10 C366 -E387 10 R363 -L385 1.53019320261165 M368 -P390 1.11170610284141 V367 -V389 1.07386288437308 P380 -L385 1.06194106352938 K361 -I379 0.701937721424431 K361 -L385 0.695546831562003 V360 -I379 0.678435803676228 M368 -V389 0.607039136543641 V365 -E387 0.589855942524403 Y364 -L385 0.50798065403972 M368 -A388 0.451735233284042 G369 -T391 0.446387080475104 V365 -V386 0.441505279066127 M368 -I374 0.43454447189171 S362 -L385 0.40083886283243 Y364 -I379 0.394276801321602 C366 -L376 0.386191169232825 R363 -P380 0.386056789834287 C366 -K381 0.368140682651805 K361 -M382 0.333282319136548 M368 -T391 0.329387566503505 I379 -V386 0.32543258980663 K361 -G383 0.306141318055829 V360 -G383 0.299482649769455 G377 -V386 0.292250100018406 V378 -V386 0.283992496018039 C366 -V386 0.277891967085335 V360 -M382 0.273768567051315 C366 -T391 0.271904120111375 C366 -V389 0.270624185743108 I374 -A388 0.263672038783763 C366 -P380 0.217469041192886 V367 -E387 0.21530614476573 V367 -M373 0.207990122129947 R363 -A388 0.207483162943259 V365 -V389 0.205080677264769 C366 -G377 0.203687320312973 M373 -A388 0.197210577504364 C366 -P390 0.190930527549447 I379 -A384 0.187490863886282 K381 -E387 0.185764712896696 K361 -L376 0.183146514402067 L376 -G383 0.178513834796024 Y364 -K381 0.17743072649896 V371 -V389 0.16400815037984 G369 -I374 0.159591892277106 I379 -L385 0.159345441714754 V367 -P390 0.154733335572592 I374 -T391 0.153383930290123 C366 -I374 0.148780698702383 Y364 -L375 0.145438397680819 S362 -G383 0.141059775344718 M368 -M373 0.133390332236011 K361 -G377 0.133202533377477 V365 -V371 0.131772681237792 Y364 -P390 0.118367557995044 K361 -V386 0.117773686923179 L376 -A384 0.116465632939541 V365 -G383 0.112217497099433 P380 -A388 0.111503563938882 G370 -E387 0.11025119436662 C366 -G383 0.10929103893292 G359 -V378 0.108352391090368 R363 -I379 0.104991374734737 G359 -G377 0.104938507360377 G369 -V378 0.104814988551055 V365 -G370 0.104444269582699 V365 -L375 0.103809436803298 V360 -A384 0.103369207782446 V378 -E387 0.100248282473254 Y364 -G369 0.0994521813598777 K361 -E387 0.0980192744351953 S362 -A388 0.0970298766971107 L376 -V389 0.0913820205052158 S362 -P380 0.0899720787984464 M368 -I379 0.0881143043044017 Y364 -A384 0.0880011055963705 G370 -V378 0.0855563119626334 L375 -A388 0.0815462876606725 V360 -G377 0.078451877128753 R363 -L376 0.0765217855657983 S362 -K381 0.0729206266759062 G369 -V389 0.0717836423392608 G369 -A388 0.0707286038704558 I374 -L385 0.0631565586360305 R363 -V378 0.0619864549596727 M368 -E387 0.0609999391020044 S362 -V378 0.0584963786500867 V371 -P390 0.0557623160187333 L375 -A384 0.0528883837278806 R363 -G383 0.0519794754084 I372 -A388 0.0482919260296113 I374 -M382 0.0456451756677865 V360 -V365 0.0389103546669265 S362 -G377 0.0365943369235874 M373 -E387 0.0345278948200884 K361 -V378 0.033744675195838 Y364 -V389 0.0310506987941572 V371 -A388 0.0243041772911741 I374 -A384 0.0170011532210355 R363 -I374 0.0162769446954041 G370 -V386 0.0153463415350288 V365 -I372 0.0144406461518161 R363 -V389 0.0131454984979831 G377 -M382 0.0128003397972449 I374 -K381 0.0101923702542681 G359 -K381 0.00905216210479143 R363 -M382 0.00765695287583323 I372 -V389 0.00693575284167736 I379 -A388 0.00599509796713921 M373 -L385 0.00445595353143169 M373 -P380 0.00216617520413775 G359 -M382 0.00189538389775912 L375 -E387 0.00153514488665207 V367 -V378 0.0012463969502825 C366 -A384 0.00111227804773795 G359 -L376 -0.00148208340619238 Y364 -G383 -0.00188577496841358 P380 -V389 -0.00210071357556796 Y364 -G377 -0.00215898717945417 S362 -L376 -0.00294513203475932 M373 -A384 -0.00545962262003652 P380 -V386 -0.00770496477079474 V367 -T391 -0.0107448321191805 V371 -T391 -0.0111917841462801 I372 -P390 -0.0136134802935195 G359 -V386 -0.0138041763713836 V365 -G377 -0.0139185420229264 L376 -E387 -0.0141326067236109 V378 -G383 -0.0159824623614728 M373 -T391 -0.016781157219266 K361 -K381 -0.0186329598717281 V378 -A388 -0.0212651648976756 G359 -P380 -0.022703229335399 G377 -V389 -0.0247490990009078 M368 -V386 -0.0274662409843334 R363 -E387 -0.0284680567587592 C366 -M373 -0.0290909437256039 G359 -L385 -0.0310684050164887 G370 -G377 -0.0325996211914097 Y364 -P380 -0.0356319957243497 I372 -G377 -0.0384405605182963 S362 -V386 -0.0384458598579118 L376 -M382 -0.0396076796945497 Y364 -M382 -0.0423941569765373 I372 -T391 -0.0429797826827256 G377 -P390 -0.0445652164340009 I374 -G383 -0.0467567946213259 V367 -P380 -0.0525948847503446 S362 -E387 -0.056965777898764 G369 -I379 -0.0597436420457642 Y364 -L376 -0.0668790916485993 G359 -Y364 -0.0672604239921112 Y364 -I372 -0.0674358164643492 V367 -I379 -0.0684721558670676 L376 -L385 -0.0694190865784421 G377 -L385 -0.0746513734180168 Y364 -M373 -0.0754131777848304 L375 -V386 -0.0759571175132141 V371 -V378 -0.0788643709991304 V365 -I374 -0.0809028025476888 V360 -V386 -0.0848596615278483 V367 -A388 -0.0890247019477233 G369 -P380 -0.0896987771682338 G370 -P390 -0.0918781222493676 Y364 -E387 -0.0939330173782293 V365 -V378 -0.0944283256222769 V365 -T391 -0.0964534672753921 C366 -V371 -0.0982780371689094 L375 -G383 -0.0988559446482089 M382 -E387 -0.101723464248686 K381 -V386 -0.101835447526802 L375 -V389 -0.103794825586497 V360 -E387 -0.103970381566971 V367 -L385 -0.104971835486205 G369 -G377 -0.106095587952335 M368 -L375 -0.109461459035462 V365 -A388 -0.111104188429845 G370 -V389 -0.112260268500656 I372 -P380 -0.120078151455628 V371 -I379 -0.12095555620446 L375 -M382 -0.121845724690024 V360 -C366 -0.125012651816241 R363 -K381 -0.125733624821526 G370 -T391 -0.125797246614724 V367 -L375 -0.127007891879693 I372 -V386 -0.127313171306438 M368 -G377 -0.129556038255546 V360 -K381 -0.130233294161877 V365 -M373 -0.131280652392205 G369 -L376 -0.132495563161592 V367 -G377 -0.133684029762275 S362 -I379 -0.13524711229809 V365 -M382 -0.142843291659534 V371 -E387 -0.14398589615784 G359 -G383 -0.144006300609072 L375 -L385 -0.145570551969362 P380 -E387 -0.147833809275681 M373 -P390 -0.149539485075883 K381 -A388 -0.149576625549089 R363 -G377 -0.150367491689242 M373 -K381 -0.150763552704974 L375 -P390 -0.153720306487752 L376 -P390 -0.153767785498681 C366 -V378 -0.153996075962099 R363 -A384 -0.156534848356859 G369 -E387 -0.15776214637607 V360 -L376 -0.158534017392174 I372 -E387 -0.161407887110287 M368 -V378 -0.161683380344358 G369 -V386 -0.16252072612572 K361 -A388 -0.163199705800358 V367 -I372 -0.168842574882146 V365 -L385 -0.169324712878286 G377 -G383 -0.171859002486892 I379 -E387 -0.17343994009705 I372 -V378 -0.17456723675498 V365 -I379 -0.176944825147875 V378 -L385 -0.182410536556147 V365 -P390 -0.184424314429858 V371 -G377 -0.187665463686914 V365 -P380 -0.191056880144919 I374 -E387 -0.19143378582533 S362 -M382 -0.19301876560378 L376 -K381 -0.194630486031863 G369 -P390 -0.198434262148542 C366 -I372 -0.198995131111523 V365 -K381 -0.199057692969119 Y364 -V378 -0.199494737922702 I374 -V389 -0.201239728689862 V365 -L376 -0.202070639671564 Y364 -I374 -0.205948937665126 C366 -M382 -0.208873989469017 V371 -L376 -0.213933305572148 M373 -V386 -0.22183232985441 G359 -I379 -0.228256312914937 R363 -M373 -0.228915782951843 L375 -K381 -0.239817436265792 I374 -P380 -0.243006575093103 K361 -C366 -0.244081014508332 I374 -P390 -0.244201799167306 G377 -E387 -0.245566123284529 C366 -L385 -0.250767983725099 I372 -I379 -0.25370468965934 C366 -I379 -0.25446291205721 G359 -A384 -0.256975469423605 V367 -L376 -0.26089227948914 G370 -A388 -0.265862120802904 V360 -L385 -0.272636705515549 K361 -P380 -0.277167453963798 L376 -A388 -0.277523657835597 M368 -L376 -0.278878559874582 V365 -A384 -0.27922107499375 V360 -P380 -0.283239129616208 G370 -L375 -0.285200093520533 V367 -I374 -0.28746694240315 G370 -L376 -0.287887324884492 S362 -A384 -0.293006367923784 M373 -M382 -0.293440687545917 L376 -V386 -0.296624075741462 M373 -V378 -0.296905303770223 G377 -A388 -0.29886377517203 G377 -A384 -0.299685220812712 I374 -I379 -0.305400762861302 G369 -L375 -0.317051992595771 V367 -V386 -0.329002889178496 Y364 -A388 -0.332809654115902 K361 -A384 -0.337940224393089 V360 -V378 -0.339523477475915 M373 -V389 -0.355603412172674 I374 -V386 -0.361529531687111 Y364 -V386 -0.362929223303093 M373 -I379 -0.401305121514577 V378 -A384 -0.435289758088347 L375 -P380 -0.537004523840351 C366 -L375 -0.537593771485207 R363 -V386 -0.679930406446205