[Wed Nov 23 03:38:16 2016] >Input file: TMP03886E12G.pdb >TM segments: 44-53_ 253-270 MAIDEN score = -6.0975 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E253 -T261 0.329849545293837 Q47 -A52 0.306972415865963 E253 -Y258 0.222334087633031 V260 -S268 0.210155381359069 G44 -L269 0.198327551146438 P48 -M53 0.187726613143299 L254 -K262 0.11447009237879 L45 -L269 0.107988541416403 L265 -F270 0.0832161874834962 G44 -S268 0.0812124587146092 T263 -F270 0.0646722840797089 T261 -F270 0.0615326780189061 F49 -T267 0.0608769092522556 A50 -S268 0.0578766186258015 L264 -F270 0.0541796004326232 K262 -F270 0.04622493974843 F49 -L264 0.0396232720036682 Y258 -T267 0.0386696328928826 L46 -M53 0.0315416915327189 F49 -S268 0.0143200939684753 E253 -K262 0.00329844638153176 F259 -T267 7.0111191734501e-05 L264 -L269 -0.00277385746560066 G44 -F270 -0.00956096254765226 A50 -T267 -0.012221715864968 L45 -A50 -0.0257401332998715 K262 -L269 -0.034247248180626 P48 -L269 -0.0400116596778677 F259 -L266 -0.0432932142649989 L46 -A52 -0.0434451151396553 Y258 -L266 -0.045419249603559 Y258 -T263 -0.0459769287421925 G44 -F49 -0.0477881967701994 F49 -L269 -0.0517652813390912 K262 -S268 -0.055924409187276 V260 -F270 -0.0623193777802689 F259 -S268 -0.068666056591667 Y255 -T261 -0.0753065599238072 Q47 -L269 -0.0795090533765093 T257 -L266 -0.0876130585718198 Y258 -L264 -0.087920024810014 L45 -S268 -0.0886678975936146 T263 -L269 -0.0916344912848359 L45 -M53 -0.0921616421994904 Y258 -L265 -0.0974337424469223 T256 -L265 -0.100644788623925 T256 -L264 -0.102164690004605 L254 -T263 -0.103959456740623 T263 -S268 -0.104456784821629 T261 -L269 -0.106036176111052 L254 -F259 -0.107224696818957 T261 -T267 -0.1129996585605 Y255 -T263 -0.115226522594325 T257 -L265 -0.12127641480167 T256 -T263 -0.128048317124537 T257 -K262 -0.131579903834266 A50 -L264 -0.133483612281158 A50 -F270 -0.140063514218802 K262 -T267 -0.141365974038357 L45 -A52 -0.143043341576397 Y255 -K262 -0.152310304994427 F49 -F270 -0.15360681562404 L46 -D51 -0.163539920287211 Q47 -M53 -0.178790230420965 Y255 -L264 -0.188162881098859 T261 -L266 -0.20399571116508 T261 -S268 -0.215761620058002 F259 -L265 -0.224351885537233 V260 -L265 -0.234815076142169 E253 -F259 -0.238374265156977 Y255 -V260 -0.241064866021879 T256 -K262 -0.265920352975217 V260 -T267 -0.269803752233998 T257 -L264 -0.286447292203961 E253 -V260 -0.289917177427711 L254 -T261 -0.291914217703358 F259 -L264 -0.297364438340763 T256 -T261 -0.30169772654909 L254 -V260 -0.361738980103329 T257 -T263 -0.366685096300943 V260 -L266 -0.405359989180157