[Fri Aug 26 16:36:53 2016] >Input file: TMP17281S2D.pdb >TM segments: 534-574 MAIDEN score = -17.2721 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q541 -L546 0.527396634322468 Q542 -E550 0.320546332172138 K564 -A572 0.309202741277808 H554 -G562 0.302119563918404 N544 -I549 0.271806683834514 S559 -Q567 0.231057297974455 Q553 -L558 0.228104917749294 K547 -L555 0.181835977868538 L556 -K564 0.181420601958751 E550 -L556 0.144198218332639 Q565 -L570 0.139698119178615 L535 -Q540 0.1338768615899 Q540 -L545 0.132906968317359 N543 -A551 0.132856491126525 K547 -Q552 0.124706548847639 Q540 -A548 0.122280308561807 L535 -N543 0.10875187197222 Q542 -K547 0.105865923846916 V539 -A548 0.0988045257711048 V539 -K547 0.0939012804778372 W561 -R569 0.0902398663198913 A551 -S559 0.0901488527317671 S559 -A568 0.0767882975455336 Q552 -I560 0.0688484688806926 V563 -A572 0.0616056314778284 S536 -N544 0.0594052702919648 Q565 -V573 0.0553860650830478 A548 -Q553 0.052308573144118 I538 -N543 0.0490006444242761 A551 -I560 0.0485671050210366 L558 -Q567 0.0470243363767375 Q553 -G562 0.0436961881570896 Q567 -E574 0.0433333653077934 L534 -Q542 0.0345066735864661 Q565 -A572 0.0310660485134338 G537 -L545 0.0290668900466997 E550 -Q557 0.0252581306247706 Q567 -A572 0.0235552149454454 R569 -E574 0.0233810100495631 G537 -N544 0.0222098256399756 I560 -A568 0.0211429613254026 L546 -L555 0.0184797165332995 S536 -N543 0.0153728521256906 A551 -L558 0.0125687802474577 L546 -H554 0.0125556250335076 E550 -L558 0.00898064484187278 I538 -K547 0.00810008401252427 G562 -L570 0.00525376374492348 L555 -I560 -0.00110669326013557 S536 -L545 -0.00305530127093734 Q541 -I549 -0.00498600536515426 Q557 -K564 -0.00769145108812541 E550 -S559 -0.0089539654892149 L555 -V563 -0.022246058493824 L545 -Q553 -0.023150514974196 I549 -Q557 -0.0234204176840929 L566 -E574 -0.0267326117329123 Q540 -K547 -0.0269375889868977 G537 -N543 -0.0274573665292532 Q565 -E574 -0.029888588980607 Q553 -S559 -0.0308367029672855 Q541 -E550 -0.031857437062735 A548 -H554 -0.0410807568877853 Q557 -Q565 -0.0453604514691124 K564 -R569 -0.0514654708745255 N544 -Q552 -0.0541528161983027 N544 -A551 -0.057026391219583 S559 -Q565 -0.0579240717711882 V539 -N544 -0.061375667368485 N543 -I549 -0.0642162671872102 L534 -N543 -0.06422203111701 L556 -Q565 -0.0659189285354378 Q553 -W561 -0.066412497620612 Q552 -Q557 -0.0671192602170982 K564 -V573 -0.0699490546164236 Q557 -L566 -0.0763618276148637 L558 -K564 -0.0786489581702554 S536 -Q542 -0.0786988647651687 A548 -Q557 -0.0815823965106186 S559 -K564 -0.0824517799128048 G562 -L571 -0.0847396959028384 Q541 -K547 -0.0898159451968352 G562 -A568 -0.0952581872859701 I549 -L558 -0.0957821035189896 Q542 -A551 -0.100482060349254 E550 -L555 -0.10508065790108 Q552 -S559 -0.105131684331174 G537 -L546 -0.10528163905871 A548 -L556 -0.10601727638468 W561 -L566 -0.106387492478067 W561 -Q567 -0.106597591103773 Q552 -W561 -0.109851474552131 L535 -N544 -0.110134028265383 L535 -Q542 -0.11515906112248 W561 -L570 -0.115531576065482 N544 -E550 -0.118855573129114 H554 -W561 -0.120566529508905 L558 -Q565 -0.126103986879789 N543 -Q552 -0.126169076668775 L545 -E550 -0.126377158231337 Q540 -I549 -0.127390135490155 Q541 -A548 -0.129805931985301 A568 -E574 -0.13339384408774 N543 -A548 -0.139148226102459 I538 -L546 -0.144077628548346 N544 -Q553 -0.146074531737099 W561 -A568 -0.148372022691244 I560 -R569 -0.151869921893311 L545 -H554 -0.155692241888751 V539 -L545 -0.164839292281758 S536 -Q541 -0.16826687057951 V563 -R569 -0.16935532494247 I538 -L545 -0.171005003455641 L555 -G562 -0.176712718898473 K564 -L571 -0.178019630786282 H554 -V563 -0.179282051162251 K547 -Q553 -0.183397352776163 L555 -K564 -0.188042478554327 L546 -Q553 -0.189430898400569 I560 -Q565 -0.199069115816807 G537 -Q542 -0.201555827238573 S559 -L566 -0.201715733051917 G562 -R569 -0.202092852007917 V563 -L571 -0.209249118769261 Q542 -A548 -0.211102857956137 L534 -Q541 -0.215251710079429 V563 -L570 -0.221456126660879 Q553 -I560 -0.221541222311283 L558 -L566 -0.225451994687387 A551 -Q557 -0.227747777579286 A548 -L555 -0.230891310613108 Q542 -I549 -0.231287361502627 K547 -L556 -0.234159978154951 L556 -W561 -0.237181122945017 K564 -L570 -0.238358457601044 L546 -A551 -0.243047155889519 L566 -L571 -0.254081072856417 N543 -E550 -0.25429890852203 L555 -W561 -0.259301152832005 I560 -Q567 -0.264490289903645 V539 -L546 -0.270206763134556 G562 -Q567 -0.276418070071058 I549 -H554 -0.27814377730459 L545 -Q552 -0.278199652108782 V563 -A568 -0.280586927918371 I538 -N544 -0.284895798519247 L558 -V563 -0.285941557525199 A551 -L556 -0.293018166402025 L566 -V573 -0.2933620665462 L535 -Q541 -0.293380220114079 L556 -V563 -0.295967254010231 K547 -H554 -0.296390870780871 Q557 -G562 -0.298206018715446 H554 -S559 -0.304977960206868 I560 -L566 -0.309556066180773 L566 -A572 -0.310321071969287 L545 -A551 -0.317237830985253 L556 -G562 -0.341000285204636 Q557 -V563 -0.375272421913764 I549 -L556 -0.384332174531437 I549 -L555 -0.399719412479642 Q567 -V573 -0.42519658875867 H554 -I560 -0.426356601029057 L534 -V539 -0.449932919214118 A568 -V573 -0.467718783782473 Q552 -L558 -0.497957570633861 L534 -Q540 -0.514794793794238 Q565 -L571 -0.518636081386618 Q540 -L546 -0.519944569355848 L546 -Q552 -0.524546086253304