[Mon Aug 29 16:47:39 2016] >Input file: TMP17755S3G.pdb >TM segments: 209-229 MAIDEN score = -0.4968 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D209 -R214 0.178497331553193 Y215 -F221 0.162828213924076 A217 -L223 0.0531572634561348 R214 -P219 0.0351157104170137 C216 -A222 0.0163988789222409 F213 -P219 0.0052861569897078 C216 -L223 -0.0430301339080712 A210 -Y215 -0.0624472916010026 Y215 -A222 -0.0687396029129363 Y215 -G220 -0.0720199259645578 C216 -F221 -0.135933345823897 P218 -L224 -0.149834181434696 P218 -L223 -0.183733466197388 A217 -A222 -0.232314141842919