[Mon Aug 29 16:49:34 2016] >Input file: TMP18799S3G.pdb >TM segments: 541-578_ 617-636 MAIDEN score = -20.2235 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E550 -I636 1.29170593031235 R547 -I636 0.563655465355342 K564 -E622 0.373687038142006 Q542 -E550 0.336538794096787 Q567 -E622 0.326558453459789 V570 -R575 0.307167100595615 T559 -T629 0.297219845578093 L546 -I636 0.281081624231018 W561 -T629 0.279560351820741 K564 -A572 0.264112971754451 E550 -T629 0.263085587014778 Q553 -S634 0.249311411937097 V573 -R578 0.243794397782922 K564 -D626 0.225516353217136 R623 -Y628 0.21263338813507 Q557 -E622 0.207726621079619 D626 -L631 0.204894895179406 N627 -L635 0.20308263403379 H554 -G630 0.1966191862522 Q542 -R547 0.191842241921258 W621 -Y628 0.189895434559746 T559 -Q567 0.187571546874532 M619 -N627 0.186584089030151 I563 -W621 0.185252304442325 R547 -Y633 0.184130946695086 L556 -K564 0.184093719326425 A551 -I636 0.183752722599889 R547 -Q552 0.182894577569478 N627 -S634 0.174871710936267 E620 -Y628 0.173188314200172 H554 -I632 0.171450974878411 A548 -I636 0.160373941897659 H554 -Y633 0.158562229990287 E550 -Q557 0.15782373892708 W561 -D626 0.15535083037647 Q553 -L558 0.154481863692043 Q557 -G630 0.153284692620758 W618 -I625 0.151853410624009 W621 -T629 0.15045588359524 Q567 -T617 0.150027239192427 Q552 -T629 0.144963708768606 L556 -G630 0.138685506808592 N543 -I636 0.136722236898986 Q567 -M619 0.131726393280369 Q553 -Y633 0.1281527558484 I549 -T629 0.127312577416504 L546 -S634 0.12415244513334 N544 -I549 0.123156122050824 M619 -Y628 0.122582062169028 V560 -A568 0.122518695586283 Y628 -Y633 0.121754852311127 H554 -G562 0.121566111839083 L545 -Q553 0.11782695424514 Q557 -R623 0.115528374708056 L556 -L631 0.115214973037815 L566 -W618 0.11486607330131 R569 -R575 0.109913422254479 V570 -T617 0.103619741716958 I563 -M619 0.103205700771865 A551 -V560 0.102421572231726 W561 -W621 0.101867770449215 Q541 -L546 0.101556403365905 L545 -L635 0.0974086951603508 T617 -R623 0.0969785504219169 K564 -R623 0.0944557510021866 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