[Fri Aug 26 16:46:21 2016] >Input file: TMP21415S1D.pdb >TM segments: 547-579 MAIDEN score = -8.1117 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E572 -A577 0.868537955217604 L565 -L575 0.773038093069713 F569 -L575 0.662410896366987 F569 -G574 0.654825900076967 D566 -C576 0.530664615355431 F569 -A578 0.501143872071003 G573 -A578 0.347647935875398 V557 -R562 0.33424728877759 R562 -L575 0.294858083581796 R563 -L568 0.289667013533909 E556 -R562 0.286115087019251 L565 -G573 0.279373507642618 D549 -V557 0.274281751878673 R562 -L567 0.271868562007794 D549 -L554 0.267078498056926 T552 -Q560 0.23907098563855 V558 -R563 0.194434794001025 L567 -G574 0.183379215500748 G564 -C576 0.164877718917236 L570 -L575 0.162596936898895 E548 -E556 0.149221966068153 S553 -V558 0.146377529649518 F569 -C576 0.134548852135058 Q560 -L568 0.117773054263276 L559 -L575 0.115989546386439 L565 -G574 0.0990357156308126 L565 -L579 0.0966767981771133 L568 -C576 0.0962286955294571 L570 -L579 0.0869794595212561 E572 -L579 0.0867005049542976 E548 -L554 0.0861860192414262 L567 -E572 0.08490955723244 L567 -A577 0.0838874068218023 L568 -L579 0.0822618519038238 S555 -G564 0.0803355502997791 L551 -Q560 0.0765578684842305 E572 -A578 0.0759804013416252 E556 -G564 0.0728961764114298 S555 -R563 0.067141101380547 Q560 -L565 0.0670418922555591 G564 -G574 0.0643134321310361 R563 -E572 0.0627716960985412 R562 -L579 0.0619918733560625 G564 -G573 0.0600595643171955 G564 -A578 0.0574386034215484 L568 -G574 0.0532709142605294 R563 -A578 0.0501166888876923 S553 -N561 0.0462627004382741 Q560 -G574 0.0362473967514063 S550 -V558 0.0356915120162341 L568 -L575 0.0348233478639859 D566 -L579 0.0306543058732522 R563 -A577 0.0297782282236883 L547 -S555 0.029462307380445 T552 -V557 0.0294468883732506 L559 -G574 0.021306890312766 L567 -L579 0.0154997173001963 K571 -A578 0.0109892625118018 S555 -R562 0.009105401644387 L565 -E572 0.00219207311363778 G564 -K571 0.00012226940492055 S550 -E556 -0.000394253381037046 N561 -D566 -0.00264057226022896 G564 -E572 -0.00344604059993614 D566 -L575 -0.00559919179781332 E556 -R563 -0.00664620001826632 T552 -N561 -0.006727744186108 L568 -A577 -0.00960714932821549 D566 -A577 -0.0102540115684615 L565 -A577 -0.0127969341234708 L570 -C576 -0.0139426138222891 R563 -G573 -0.0193580591658513 Q560 -L575 -0.0213154186561564 K571 -L579 -0.0220928762980206 V557 -L565 -0.0230798751910175 L551 -L559 -0.0305401058516352 D549 -S555 -0.0308728840944172 N561 -L575 -0.0315159315940722 D566 -A578 -0.0560154056033229 L559 -L567 -0.062377430083405 E548 -S553 -0.0668008104377105 Q560 -D566 -0.0707468379486873 L559 -C576 -0.0730607410450896 V558 -D566 -0.0749996189419599 L567 -C576 -0.0755203901217847 D549 -E556 -0.0762184889349971 L554 -R563 -0.0775979505555688 E548 -S555 -0.0777354785207353 L567 -A578 -0.0779465629305061 V558 -L567 -0.0796632276634313 S555 -Q560 -0.0879774427952609 N561 -F569 -0.0899458187815005 Q560 -L567 -0.0970759761019213 D566 -G574 -0.0987859328633311 R562 -L570 -0.101343755291714 V558 -L575 -0.102325312290932 R563 -G574 -0.102696030658276 R562 -A578 -0.104948301274553 R563 -K571 -0.108708191258954 S553 -R562 -0.10969457911376 N561 -L570 -0.110384584589988 E548 -V557 -0.11102834061426 D566 -G573 -0.115699582709564 Q560 -F569 -0.120875906485065 D566 -E572 -0.121040934101609 R563 -L575 -0.122819308025694 L554 -R562 -0.123759079450908 L551 -E556 -0.127970660216133 L559 -L568 -0.129072768695298 L554 -N561 -0.135346229444531 L568 -G573 -0.135402466866186 R562 -A577 -0.13968954661652 V557 -G564 -0.147076420173213 N561 -L568 -0.147236375403369 V557 -R563 -0.154002607696909 L565 -K571 -0.158305244156491 E556 -N561 -0.160717717216257 R562 -G573 -0.161089359984905 G573 -L579 -0.161144903789763 F569 -L579 -0.161203753300555 L547 -E556 -0.164035686326065 E556 -L565 -0.165602330607128 D566 -K571 -0.170143065582762 S550 -L559 -0.172261897522854 N561 -G574 -0.177355092179335 R562 -F569 -0.180179608225405 S553 -Q560 -0.18060363493808 G564 -F569 -0.183276709927913 S550 -V557 -0.18657529738824 L547 -L554 -0.187741430169771 R563 -C576 -0.188514497103021 R563 -F569 -0.193436296586972 L547 -T552 -0.195952066537402 S553 -L559 -0.198829035782154 V558 -G564 -0.201011696132374 L570 -A577 -0.20118740102805 L551 -V558 -0.201428359379329 R562 -G574 -0.208003150861845 L568 -A578 -0.208500471837564 R563 -L570 -0.214359046087098 L565 -A578 -0.215249247215055 T552 -V558 -0.216486227157983 L567 -G573 -0.234840303542908 K571 -C576 -0.235100901846185 V557 -D566 -0.243554817081161 L570 -A578 -0.246076859403018 N561 -L567 -0.248397616756961 R562 -L568 -0.248605749353262 D549 -V558 -0.255533863400077 T552 -L559 -0.264424790257034 G564 -L570 -0.283253476712428 V558 -L565 -0.287165385123032 G574 -L579 -0.289507341750804 N561 -C576 -0.294229455603035 L554 -L559 -0.297007310745009 K571 -A577 -0.300252252378433 L559 -D566 -0.306419183743422 S555 -N561 -0.316983669522034 F569 -A577 -0.324571916745571 G564 -L575 -0.33710697720371 L547 -S553 -0.343465609036641 L559 -L565 -0.364202764371631 L565 -L570 -0.380384934028305 L559 -G564 -0.391360956307302 L567 -L575 -0.402364905773534 L554 -Q560 -0.407030967199766 L551 -V557 -0.408538768781811 L565 -C576 -0.422034710637951 S550 -S555 -0.523375628065643 R562 -C576 -0.606704060194211