[Fri Aug 26 16:53:47 2016] >Input file: TMP31791M1D.pdb >TM segments: 226-247 MAIDEN score = 9.3393 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I239 -Q244 10 I239 -T245 0.241148827115878 K238 -Q244 0.218647552949578 K236 -T241 0.15272519283131 T241 -G247 0.108899429113161 I239 -G247 0.1029275709539 L237 -T243 0.0655853702684334 K238 -T245 0.0153030998079648 K238 -V246 0.00629728772609717 L237 -T245 -0.0175928600212689 L237 -Q244 -0.0196969987788775 D240 -G247 -0.0420172789998463 L237 -I242 -0.0466270308140615 I235 -D240 -0.0591322933219202 D240 -T245 -0.080476719801498 T241 -V246 -0.112086510850347 K238 -T243 -0.142377242995526 K236 -Q244 -0.19201189335127 D240 -V246 -0.200533460870787 I242 -G247 -0.239332537986657 I239 -V246 -0.420314071479856