[Fri Aug 26 16:56:00 2016] >Input file: TMP31819S1D.pdb >TM segments: 98-118 MAIDEN score = -2.9702 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K102 -Q108 0.4426972666499 N103 -H110 0.340482021982689 N112 -W117 0.317199233029895 M109 -D118 0.295033949202199 V106 -E111 0.224387131199498 K102 -E107 0.211486328009729 N103 -Q108 0.208338762118169 M105 -H110 0.180919532710783 M109 -W117 0.155489746748071 N112 -D118 0.151960771043595 N103 -E111 0.125413634773167 N99 -E107 0.124253178580276 N104 -E111 0.110165982842322 N103 -N112 0.0971421479704326 W101 -V106 0.0844003212567745 Q108 -L116 0.0790440804385826 M105 -E111 0.0714357184268901 M100 -M109 0.0696973753544997 N99 -V106 0.0689261766191407 N104 -N112 0.0624288700959247 M100 -E107 0.0578683437825811 N99 -N104 0.0546518058419578 M105 -I113 0.0338673519270416 F98 -V106 0.0276564202824656 I113 -D118 0.0270669641721364 K102 -H110 0.00181348830793393 W101 -M109 -0.0177205243273331 M100 -H110 -0.0267595227268926 W101 -H110 -0.0282230252374411 F98 -N104 -0.0420967908892553 E111 -W117 -0.052895004580316 V106 -S115 -0.0679273091113961 W101 -Q108 -0.0752875084070335 Q108 -W117 -0.0864009538503434 E111 -D118 -0.0924593315762666 E107 -S115 -0.0955108942258174 H110 -W117 -0.100877310933492 M100 -M105 -0.103425594596646 F98 -N103 -0.108781560561348 N104 -M109 -0.113247161579752 E111 -L116 -0.115736585015869 N103 -M109 -0.11759488276094 M105 -N112 -0.118995426051559 V106 -I114 -0.120028028621478 N104 -H110 -0.122031543896408 E107 -N112 -0.128745979271925 N104 -I113 -0.140706574790812 W101 -E107 -0.149272525966048 Q108 -I114 -0.150143033896352 M100 -Q108 -0.153215991697875 K102 -M109 -0.154386540117986 E107 -I114 -0.158076898260055 H110 -L116 -0.160788149186884 Q108 -S115 -0.162411465391272 E107 -L116 -0.165855395143691 Q108 -I113 -0.171188538519377 M109 -S115 -0.192768246165741 E107 -I113 -0.196206823884223 V106 -I113 -0.200970444276485 M105 -I114 -0.208104661635536 F98 -M105 -0.25068997014699 N99 -M105 -0.255130731870232 M109 -L116 -0.284073447933052 M100 -V106 -0.288560445534885 H110 -D118 -0.309411900078866 V106 -N112 -0.336688428656235 H110 -S115 -0.367714815719633 M109 -I114 -0.402956395728433