[Mon Aug 29 17:00:58 2016] >Input file: TMP34576S2G.pdb >TM segments: A1267-1276_A1361-1392 MAIDEN score = 0.5420 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I1368A-V1392A 1.60405459548129 F1366A-F1390A 1.35491828153582 T1365A-F1390A 0.676211181670855 A1383A-F1390A 0.61786609928703 A1367A-F1390A 0.614861978336976 T1365A-A1383A 0.556505578910928 F1366A-Y1391A 0.555576741832672 N1364A-G1384A 0.536250187400376 I1368A-Y1391A 0.490974118094736 T1365A-I1382A 0.483300533799321 F1366A-I1382A 0.399072750791535 V1374A-L1379A 0.393959954852365 N1364A-A1383A 0.376751595208532 F1366A-G1384A 0.300913012635823 A1383A-Y1391A 0.299431694805106 G1369A-Y1391A 0.296898713096374 V1370A-V1392A 0.279111447319205 G1369A-E1380A 0.244476818330512 S1385A-F1390A 0.243866426235185 G1369A-A1383A 0.24360915079144 A1367A-S1381A 0.227502504136824 H1373A-L1379A 0.222575081898169 F1366A-W1389A 0.210511026828994 G1369A-A1376A 0.182897600909242 G1369A-N1387A 0.177343940003257 S1377A-N1387A 0.176136545733424 G1384A-W1389A 0.172664483568299 I1368A-W1389A 0.169705898475236 I1368A-N1387A 0.152700525405514 E1380A-R1388A 0.151054431016774 I1368A-E1380A 0.143235521947333 E1380A-S1385A 0.141291114428124 S1385A-V1392A 0.136790841559874 A1367A-S1385A 0.136271944864296 A1376A-S1381A 0.135284595450207 F1366A-V1392A 0.13241493752012 T1268A-N1364A 0.121769053022216 D1372A-S1377A 0.119422307172817 I1368A-V1374A 0.119292528908963 G1369A-R1388A 0.114088787631787 T1365A-V1392A 0.110281193910925 I1368A-I1382A 0.110098522825373 Y1275A-G1369A 0.109367248725808 R1269A-N1364A 0.108505230121564 S1362A-A1383A 0.10782362545783 S1381A-V1392A 0.101707740762688 E1380A-Y1391A 0.100515388434092 A1367A-L1375A 0.0924882837110392 L1272A-I1363A 0.0909733622153195 H1373A-E1380A 0.0878910838652343 T1371A-S1377A 0.0857004230296251 F1366A-E1380A 0.0851687666938172 V1370A-Y1391A 0.0848497828764352 A1367A-I1382A 0.0796201917415837 D1372A-E1378A 0.0781010780714084 G1369A-G1384A 0.0748914049467536 H1373A-S1381A 0.0657956470476344 G1369A-S1381A 0.0648109318118326 F1366A-L1379A 0.0640819415544094 T1365A-R1388A 0.0640297560377846 A1367A-Y1391A 0.0637355017494432 S1362A-S1385A 0.0624174727285149 V1374A-Y1391A 0.059687594799537 S1362A-F1390A 0.055334866990818 I1363A-S1385A 0.0459801136436102 I1273A-I1368A 0.0434724878769108 I1368A-L1379A 0.0430982384577057 T1268A-I1363A 0.0418570726195648 L1375A-S1381A 0.0418055446843608 V1374A-I1382A 0.0402431166368586 L1379A-N1387A 0.0400525019157989 A1367A-A1376A 0.0392133716140641 L1361A-I1382A 0.0366442602995951 S1381A-R1388A 0.035860285802376 I1273A-T1365A 0.033616265031851 N1364A-S1381A 0.033071381496218 G1271A-N1364A 0.0309794183897454 N1364A-Y1391A 0.0301253025401835 V1370A-A1376A 0.0282270425365425 T1365A-N1387A 0.026553870485897 H1373A-Y1391A 0.0241306914301862 N1364A-N1387A 0.0220556445907075 I1368A-G1384A 0.0189586520282288 G1369A-E1378A 0.0187817190230908 L1272A-I1368A 0.0185807841640449 G1369A-V1392A 0.0182608265363462 R1269A-I1363A 0.0180980099164358 A1367A-P1386A 0.0174952542641069 I1382A-V1392A 0.0157641516568249 F1366A-A1383A 0.0156950504086675 F1366A-S1385A 0.0150571640124332 S1377A-Y1391A 0.0145957096525731 L1379A-Y1391A 0.0130684002528199 I1368A-H1373A 0.00993397899808535 G1369A-S1377A 0.00848848814661674 T1371A-Y1391A 0.00768448546264322 G1271A-T1365A 0.00728454101938159 L1375A-E1380A 0.00673812567695986 S1276A-T1371A 0.00519105560069733 G1384A-Y1391A 0.00178556143342568 G1369A-I1382A -0.00296673122994506 I1368A-R1388A -0.00358971590974555 F1366A-S1381A -0.00529218148987454 N1364A-R1388A -0.00810343176261918 L1361A-G1384A -0.00831036469906055 E1380A-N1387A -0.0140505864614215 V1374A-A1383A -0.0192774047945099 L1272A-A1367A -0.0224701999686161 V1270A-T1365A -0.0228036630262878 A1367A-L1379A -0.0238961369718904 V1370A-A1383A -0.0250931617545573 T1365A-Y1391A -0.0253560381474509 D1372A-L1379A -0.028688583662664 V1370A-L1375A -0.0291158320138045 L1361A-A1383A -0.0293139778192337 I1382A-R1388A -0.0323488625118022 I1368A-A1376A -0.035825168364477 I1368A-S1381A -0.0360149836752228 N1364A-W1389A -0.0377556960275169 A1367A-V1392A -0.0389472809993299 V1370A-S1377A -0.0397882946537704 P1386A-Y1391A -0.0426000987273226 I1368A-F1390A -0.0459742143230599 I1363A-W1389A -0.0473309525430654 S1385A-Y1391A -0.0473962854070136 T1365A-P1386A -0.0479904795423112 I1273A-A1367A -0.0502008433455803 I1382A-W1389A -0.0506965699743507 S1381A-Y1391A -0.0508723654626611 I1368A-S1385A -0.0526071235692838 A1376A-V1392A -0.0544231490075693 Y1275A-V1370A -0.0573030761325768 V1374A-N1387A -0.0603625055427188 Q1274A-A1367A -0.0621633783023112 L1361A-S1385A -0.0626040808446842 Y1275A-I1382A -0.0642264977406855 T1371A-V1392A -0.0651017394400966 I1273A-F1366A -0.0684919690695371 S1362A-P1386A -0.0689533388419425 Y1275A-I1368A -0.0702415505412985 V1370A-L1379A -0.0710359170593851 S1362A-I1382A -0.0721995157528093 P1386A-V1392A -0.0739961510394807 I1363A-Y1391A -0.0748619746463586 S1381A-F1390A -0.0761751704343181 L1375A-R1388A -0.0789978374097349 I1363A-S1381A -0.0801720824501067 L1375A-Y1391A -0.0807196134896335 V1270A-F1366A -0.0814922177678818 S1381A-W1389A -0.0815578246990722 G1369A-F1390A -0.0823739753628168 E1380A-F1390A -0.0851071017760683 I1363A-F1390A -0.085237985811812 L1379A-V1392A -0.087424040920923 V1270A-N1364A -0.0888463917830284 I1368A-L1375A -0.0921167875026993 V1370A-E1378A -0.0970802299132214 L1272A-T1365A -0.0973087921318142 A1376A-Y1391A -0.0975658974027338 F1366A-N1387A -0.0986138231144136 F1366A-P1386A -0.100105634370897 I1368A-P1386A -0.101982215154548 N1364A-V1392A -0.102401243187055 V1370A-S1381A -0.104564687945104 T1371A-E1380A -0.104710750565101 T1371A-L1379A -0.105146131159482 H1373A-E1378A -0.106077559808408 N1364A-F1390A -0.107885053754085 G1369A-L1379A -0.108261377368987 D1372A-V1392A -0.112226063221805 A1383A-W1389A -0.113080571295631 Y1275A-A1367A -0.113462716401477 G1271A-I1363A -0.116072438088461 V1270A-I1363A -0.11927453777804 F1366A-V1374A -0.123589974852945 A1367A-A1383A -0.123818247737525 L1272A-F1366A -0.124713744938548 N1364A-P1386A -0.125129429198599 S1362A-G1384A -0.129685312008283 Q1274A-I1368A -0.129969996313829 I1363A-P1386A -0.132811529499927 V1374A-F1390A -0.138430797077834 S1381A-P1386A -0.138482393059082 G1369A-W1389A -0.141111205374111 N1387A-V1392A -0.144065013802654 T1365A-E1380A -0.146901156677643 V1370A-F1390A -0.14730967785405 A1367A-W1389A -0.150936065400197 L1375A-V1392A -0.152561601613183 I1363A-N1387A -0.155257958942211 A1367A-H1373A -0.1559159617854 I1382A-N1387A -0.15640465610529 G1384A-V1392A -0.156639035105651 A1367A-V1374A -0.162117546212476 L1375A-N1387A -0.165817010444905 T1371A-A1376A -0.167410854397878 I1363A-I1382A -0.185180417141868 I1368A-A1383A -0.187768956422572 A1367A-N1387A -0.18832852946808 A1383A-R1388A -0.18947703038911 I1363A-G1384A -0.191758874316193 E1380A-V1392A -0.194044170794205 V1370A-E1380A -0.194439889644478 S1381A-N1387A -0.195324731631653 I1382A-Y1391A -0.195923173930281 A1383A-V1392A -0.20187769736626 T1371A-E1378A -0.202523499710547 T1365A-S1385A -0.212038512818133 H1373A-V1392A -0.215223801375858 V1374A-E1380A -0.228157517004627 A1367A-R1388A -0.231724153835708 F1366A-R1388A -0.23327959216451 N1364A-I1382A -0.233366117573595 G1384A-F1390A -0.233903571833793 T1365A-S1381A -0.236351887121467 N1364A-S1385A -0.240377376495912 D1372A-E1380A -0.25919690514133 I1382A-F1390A -0.25950312147383 V1374A-S1381A -0.259885605811482 A1367A-E1380A -0.293263910857685 T1365A-W1389A -0.319315095694074 T1365A-G1384A -0.337201767508573 G1369A-L1375A -0.338892140704129 I1363A-A1383A -0.343106805870769 G1369A-V1374A -0.3443673220854 E1380A-P1386A -0.345505762887891 V1374A-V1392A -0.350231109053508 A1367A-G1384A -0.47856285904225