[Mon Aug 29 17:02:23 2016] >Input file: TMP40071M1G.pdb >TM segments: 113-130_ 158-165 MAIDEN score = 41.6438 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C129 -A161 10 S113 -C125 10 C125 -F165 10 S113 -P124 10 L128 -T163 0.847765167798816 C129 -L159 0.571285853311162 C129 -T163 0.544833883899358 P124 -F165 0.51627849486948 D114 -C125 0.502028674355102 E126 -F165 0.493176542640851 D114 -F119 0.492256118246024 S113 -F165 0.463270390996287 A130 -L159 0.447951365304423 E121 -T127 0.444072848115193 T127 -A161 0.397046391903138 C129 -P160 0.37631568911619 F119 -C129 0.358978594715192 A130 -A161 0.318511648194771 C129 -F165 0.280472652701583 K118 -P124 0.272644378109803 A130 -P160 0.260602087278273 C125 -T164 0.250982241913426 E121 -C129 0.250904863371728 C125 -T163 0.216784232342741 F119 -E126 0.204142136875411 P124 -T164 0.196185502392694 E126 -A162 0.184346094703227 Y115 -G120 0.182904275933168 L128 -A161 0.179218801452678 Y115 -E121 0.178158826492457 C129 -A162 0.177138465295879 D114 -T127 0.174496061811532 F119 -T127 0.166693275885589 S113 -L128 0.162128792691267 G120 -A130 0.161636831452177 D122 -T164 0.159359356101167 D122 -T163 0.154144595969248 G120 -L128 0.140832651860785 K118 -N123 0.140051578819145 K118 -T163 0.127754260692088 D114 -T164 0.115946742675471 S113 -E126 0.113249747051324 K116 -T127 0.108385951475937 G120 -T127 0.0928642317253666 L117 -P124 0.0907003697079176 C129 -T164 0.0848477996011701 Y115 -T127 0.0835150342655449 K118 -L128 0.0823075014330525 S113 -C129 0.0789864828004488 T127 -A162 0.0753600821280358 T127 -T163 0.0721001054027841 G120 -E126 0.0693781764552617 Y115 -D122 0.0679471134615266 K116 -F165 0.0652223669376699 F119 -L128 0.0640473381825046 K116 -D122 0.0603446436408288 Y115 -T163 0.0569576230378854 N123 -T163 0.0547241496602018 K116 -N123 0.0463131901617801 K118 -T164 0.0426821452984459 D114 -T163 0.0371293906052506 S113 -G120 0.0348290322138916 S113 -A162 0.0335412422374777 A130 -T164 0.0312007814413944 A130 -T163 0.0304003758156357 L117 -T127 0.0256409310771275 Y115 -E126 0.019903581457462 E126 -T163 0.01140873841788 C125 -A162 0.00845352340468208 D114 -G120 0.00336026510950349 L159 -T164 0.000443723498025461 L117 -D122 0.000336623641368661 E121 -L128 -0.00206607029519024 F119 -P124 -0.00364676949253973 F119 -C125 -0.00375060575346042 L117 -C129 -0.00921719687958222 L128 -A162 -0.009973899142661 G120 -C125 -0.014101681613397 P124 -T163 -0.0141905605694408 D114 -P124 -0.0148225193342282 F119 -T163 -0.0162333152331575 K116 -E126 -0.0308746423221367 S113 -E121 -0.0308885683157492 N123 -L128 -0.0315040809012563 L128 -E158 -0.0353232995086579 N123 -A162 -0.0490973868401947 C125 -A161 -0.049167008640407 D122 -F165 -0.0589257045637952 T127 -L159 -0.059602017923404 S113 -K118 -0.0609296971686974 D122 -T127 -0.0674439705642849 P124 -A162 -0.0695191985871655 N123 -F165 -0.0703206305742731 L128 -F165 -0.072581240509181 Y115 -F165 -0.0745766537482035 G120 -C129 -0.0789987258105427 Y115 -N123 -0.0821020761083622 T127 -P160 -0.0833111690181417 D114 -L128 -0.0898969246953829 D114 -E121 -0.0950436629829181 D114 -E126 -0.0971898311448826 K116 -P124 -0.0991082480265311 S113 -D122 -0.107108364709406 K118 -A130 -0.108938652841169 L117 -C125 -0.13150131254887 T127 -T164 -0.136244475035501 D122 -A162 -0.138120742922062 L117 -N123 -0.141316791787225 K116 -E121 -0.145639597973339 S113 -F119 -0.14658678204992 K118 -A161 -0.158034768230054 L117 -E126 -0.159567672244426 E126 -A161 -0.16049609335119 Y115 -P124 -0.168036419046283 D122 -C129 -0.17225946311359 D114 -D122 -0.185258080324113 A130 -A162 -0.188227592668931 N123 -T164 -0.195926051998559 E121 -E126 -0.196716477156788 K118 -T127 -0.205164976129657 D122 -L128 -0.205579485881523 K118 -E126 -0.210517749795929 Y115 -C125 -0.236369003118982 S113 -T163 -0.239166488114787 K116 -C125 -0.245941918288897 K118 -C129 -0.246906318467543 E126 -P160 -0.259598889590523 L128 -P160 -0.269860355188178 N123 -C129 -0.271031631670597 T127 -F165 -0.275536671891519 D114 -F165 -0.279262470665736 S113 -T127 -0.283432683885637 S113 -T164 -0.288471411629307 L128 -L159 -0.288629318756914 A130 -E158 -0.297246386203527 K118 -C125 -0.305925428251348 L128 -T164 -0.335923745655406 K118 -F165 -0.388414619037373 D114 -N123 -0.422607778820473 S113 -N123 -0.470786779835072 E126 -T164 -0.483066143381612 C129 -E158 -0.490286392783377