[Mon Aug 29 17:03:38 2016] >Input file: TMP49853S1G.pdb >TM segments: 185-198 MAIDEN score = -0.4798 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K187 -L192 0.571537238199027 N188 -K195 0.416461349812 R189 -K195 0.331044358444613 L192 -E198 0.174105800763242 N188 -L196 0.168466025952171 R189 -E194 0.101584653617639 L185 -L192 0.0719500119204799 L185 -S190 0.0634918491499814 K187 -F193 0.0583737902806922 L185 -W191 0.0389071639100411 R189 -E198 0.034264687268621 F193 -E198 0.0245635249891363 S190 -E197 0.0203997688789714 N188 -E194 -0.0541859035136838 S190 -E198 -0.0574113850741398 N188 -F193 -0.07019584140869 R189 -E197 -0.0802203464456905 W191 -E197 -0.110375095339061 K187 -K195 -0.114378556880607 Q186 -W191 -0.115478937644744 L192 -E197 -0.12389628343613 S190 -K195 -0.157264917014216 W191 -E198 -0.15965517437614 W191 -L196 -0.162261379850486 Q186 -L192 -0.168018192572962 K187 -L196 -0.170414597726376 K187 -E194 -0.177222638547261 Q186 -K195 -0.198823122851634 R189 -L196 -0.199256007810424 S190 -L196 -0.201133287865769 L185 -K195 -0.234751750945809