[Fri Aug 26 17:01:38 2016] >Input file: TMP51515M1D.pdb >TM segments: 390-410 MAIDEN score = -3.0055 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- T401 -L406 1.14012681709307 T401 -G407 0.422732521065631 S400 -G405 0.331882435981915 S400 -L406 0.318171207304276 L393 -A398 0.27372614149641 I395 -S400 0.261162020674469 V399 -L406 0.19525555903434 G402 -I410 0.176298203441211 G394 -G402 0.14148100905785 T401 -S409 0.139673442853933 T403 -S409 0.136629650472268 A398 -G405 0.132773980805815 V399 -Y408 0.124015667527247 T396 -G402 0.0913410804586169 T396 -G405 0.0886223539995116 A398 -G407 0.0737207058765792 T396 -A404 0.0566843427735688 L393 -T401 0.0557545026532846 G394 -V399 0.0352912800239142 L390 -V399 0.0338673835954326 G392 -S400 0.0323391905819488 I395 -T403 0.0289959259774415 I395 -G402 0.0173774627619823 A398 -A404 0.0118077332335661 T397 -G407 0.0101519570569844 S400 -S409 0.00669229113657821 L390 -A398 0.00644728206834344 T397 -G405 -0.00311053933291117 L390 -T401 -0.00566947951154551 G402 -Y408 -0.00715339669929982 T397 -Y408 -0.0193113594380965 L390 -S400 -0.0212645349881795 G394 -L406 -0.0235055400431241 V391 -T396 -0.0283404686619129 T397 -A404 -0.0292472374217967 T396 -T403 -0.0303801965616172 I395 -L406 -0.036261800469191 G394 -T403 -0.0526239458917668 T401 -Y408 -0.0535282782687085 T396 -L406 -0.0544174714175956 T403 -Y408 -0.0546481989288941 G392 -T401 -0.0552628107878416 S400 -I410 -0.0613748096657094 V391 -S400 -0.0631371814999047 V399 -G405 -0.073519278220763 V391 -V399 -0.0868815348161909 G394 -S400 -0.098730589906739 A398 -Y408 -0.103925659613545 I395 -G405 -0.104899361617612 S400 -G407 -0.115666855901479 T401 -I410 -0.131455100064235 T397 -G402 -0.134672172723357 A404 -I410 -0.139115840149037 G405 -I410 -0.140057118511601 G392 -V399 -0.143573644399463 G394 -T401 -0.146797937105035 G402 -S409 -0.148151909575587 V391 -A398 -0.149212783588104 V399 -G407 -0.15462584577277 L393 -V399 -0.156577487132001 T397 -T403 -0.192577930204886 A404 -S409 -0.197993212749094 L393 -S400 -0.202007351407197 I395 -T401 -0.212774101142013 V391 -T397 -0.214235748360307 G402 -G407 -0.240845463753937 L390 -T397 -0.246330873468001 S400 -Y408 -0.253159222287923 A398 -T403 -0.256270324130524 A398 -L406 -0.262602019519003 G392 -A398 -0.263331486124168 T396 -T401 -0.280265432904956 T403 -I410 -0.294279025909056 L390 -I395 -0.305333515101896 L390 -T396 -0.307835838195605 T397 -L406 -0.308485453908097 V399 -A404 -0.322490687449896 G392 -T397 -0.360627242501691