[Mon Aug 29 17:07:45 2016] >Input file: TMP58873M1G.pdb >TM segments: 27-43 MAIDEN score = -0.7550 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A33 -H38 0.476780297480549 D37 -F43 0.300253520185217 E36 -V41 0.250188589901135 H38 -F43 0.209191949229103 A27 -A33 0.206628116209597 P32 -H38 0.205617115679899 A34 -W39 0.102151280815542 A34 -L42 0.0644783840718375 L31 -D37 0.0582064649497864 D37 -L42 0.053336076861763 L31 -H38 0.0419289398835074 A27 -A34 0.0257886813416399 P32 -K40 0.0169204953473101 A34 -V41 0.00491367153214251 A34 -K40 -0.00473740611727447 A34 -F43 -0.00775182705966482 E36 -L42 -0.0158296510936395 A33 -V41 -0.0172166646064735 P35 -F43 -0.0237522816855555 P35 -L42 -0.0254022791805619 E28 -A33 -0.0330149674835649 A33 -K40 -0.0375066028253741 P32 -V41 -0.0738945950238418 A33 -F43 -0.0852364966842343 A33 -W39 -0.134324350778206 A33 -L42 -0.14743329722182 P32 -W39 -0.15448225959797 L31 -E36 -0.157172869149274 P35 -V41 -0.186802251500765 P32 -D37 -0.378764951054643 P35 -K40 -0.405601336192954 A27 -P32 -0.426636465825602 E36 -F43 -0.455808018786902